Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nup43P59235 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nup43P59235 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nup43P59235 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nup43P59235 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nup43P59235 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup43P59235 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup43P59235 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.43□□□□□ -0.26
Nup43P59235 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.43□□□□□ -0.26
Nup43P59235 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup43P59235 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup43P59235 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup43P59235 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup43P59235 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup43P59235 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Nup43P59235 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup43P59235 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Nup43P59235 Gm15957-201ENSMUST00000118893 974 ntBASIC13.43□□□□□ -0.26
Nup43P59235 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup43P59235 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.43□□□□□ -0.26
Nup43P59235 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup43P59235 Gm27533-201ENSMUST00000183800 152 ntBASIC13.43□□□□□ -0.26
Nup43P59235 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.43□□□□□ -0.26
Nup43P59235 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup43P59235 Gm44872-201ENSMUST00000207864 420 ntBASIC13.43□□□□□ -0.26
Nup43P59235 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup43P59235 Gm16476-201ENSMUST00000221544 139 ntBASIC13.43□□□□□ -0.26
Nup43P59235 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup43P59235 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup43P59235 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup43P59235 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup43P59235 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup43P59235 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup43P59235 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup43P59235 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup43P59235 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Nup43P59235 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup43P59235 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.43□□□□□ -0.26
Nup43P59235 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nup43P59235 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup43P59235 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup43P59235 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nup43P59235 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup43P59235 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup43P59235 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nup43P59235 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Nup43P59235 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup43P59235 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Nup43P59235 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup43P59235 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup43P59235 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup43P59235 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup43P59235 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.42□□□□□ -0.26
Nup43P59235 Gm15920-201ENSMUST00000118998 402 ntBASIC13.42□□□□□ -0.26
Nup43P59235 Mir1897-201ENSMUST00000122581 272 ntBASIC13.42□□□□□ -0.26
Nup43P59235 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nup43P59235 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Nup43P59235 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.42□□□□□ -0.26
Nup43P59235 Gm38294-201ENSMUST00000192831 381 ntBASIC13.42□□□□□ -0.26
Nup43P59235 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup43P59235 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.42□□□□□ -0.26
Nup43P59235 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.42□□□□□ -0.26
Nup43P59235 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.42□□□□□ -0.26
Nup43P59235 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup43P59235 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup43P59235 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup43P59235 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup43P59235 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nup43P59235 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup43P59235 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Nup43P59235 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.42□□□□□ -0.26
Nup43P59235 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup43P59235 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Nup43P59235 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup43P59235 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Nup43P59235 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.42□□□□□ -0.26
Nup43P59235 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup43P59235 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup43P59235 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup43P59235 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup43P59235 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nup43P59235 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.41□□□□□ -0.26
Nup43P59235 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup43P59235 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup43P59235 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup43P59235 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.41□□□□□ -0.26
Nup43P59235 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup43P59235 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Nup43P59235 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Nup43P59235 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup43P59235 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Nup43P59235 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.41□□□□□ -0.26
Nup43P59235 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup43P59235 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Nup43P59235 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Nup43P59235 Gm17837-201ENSMUST00000186435 985 ntBASIC13.41□□□□□ -0.26
Nup43P59235 Gm6888-201ENSMUST00000221983 706 ntBASIC13.41□□□□□ -0.26
Nup43P59235 Shd-206ENSMUST00000225145 998 ntBASIC13.41□□□□□ -0.26
Nup43P59235 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup43P59235 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms