Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox6P40645 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox6P40645 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Sox6P40645 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Sox6P40645 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox6P40645 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox6P40645 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sox6P40645 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox6P40645 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox6P40645 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.37□□□□□ -0.27
Sox6P40645 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox6P40645 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox6P40645 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox6P40645 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Sox6P40645 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sox6P40645 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Sox6P40645 Gm14494-201ENSMUST00000118786 435 ntBASIC13.37□□□□□ -0.27
Sox6P40645 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sox6P40645 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox6P40645 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.37□□□□□ -0.27
Sox6P40645 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.37□□□□□ -0.27
Sox6P40645 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.37□□□□□ -0.27
Sox6P40645 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Sox6P40645 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.37□□□□□ -0.27
Sox6P40645 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox6P40645 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox6P40645 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox6P40645 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox6P40645 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox6P40645 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.37□□□□□ -0.27
Sox6P40645 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox6P40645 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox6P40645 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox6P40645 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox6P40645 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.37□□□□□ -0.27
Sox6P40645 Matn2-206ENSMUST00000228570 2798 ntBASIC13.37□□□□□ -0.27
Sox6P40645 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox6P40645 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox6P40645 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox6P40645 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox6P40645 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox6P40645 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox6P40645 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox6P40645 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
Sox6P40645 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox6P40645 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.36□□□□□ -0.27
Sox6P40645 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox6P40645 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sox6P40645 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox6P40645 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox6P40645 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox6P40645 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox6P40645 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Sox6P40645 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox6P40645 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.36□□□□□ -0.27
Sox6P40645 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.36□□□□□ -0.27
Sox6P40645 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sox6P40645 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Sox6P40645 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.36□□□□□ -0.27
Sox6P40645 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC13.36□□□□□ -0.27
Sox6P40645 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.36□□□□□ -0.27
Sox6P40645 Gm27301-201ENSMUST00000184012 127 ntBASIC13.36□□□□□ -0.27
Sox6P40645 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.36□□□□□ -0.27
Sox6P40645 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.36□□□□□ -0.27
Sox6P40645 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox6P40645 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Sox6P40645 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.36□□□□□ -0.27
Sox6P40645 Gm10154-201ENSMUST00000084445 354 ntBASIC13.36□□□□□ -0.27
Sox6P40645 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Sox6P40645 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox6P40645 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox6P40645 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox6P40645 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox6P40645 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox6P40645 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox6P40645 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sox6P40645 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox6P40645 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox6P40645 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Sox6P40645 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox6P40645 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox6P40645 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox6P40645 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Sox6P40645 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Sox6P40645 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sox6P40645 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox6P40645 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sox6P40645 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox6P40645 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox6P40645 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.35□□□□□ -0.27
Sox6P40645 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox6P40645 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox6P40645 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Sox6P40645 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox6P40645 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Sox6P40645 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Sox6P40645 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.35□□□□□ -0.27
Sox6P40645 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox6P40645 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.35□□□□□ -0.27
Sox6P40645 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms