Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
Sftpa1P35242 Gm12928-201ENSMUST00000117115 573 ntBASIC13.08□□□□□ -0.32
Sftpa1P35242 Gm15957-201ENSMUST00000118893 974 ntBASIC13.08□□□□□ -0.32
Sftpa1P35242 Gm11814-201ENSMUST00000119515 929 ntBASIC13.08□□□□□ -0.32
Sftpa1P35242 Gm12882-201ENSMUST00000121696 517 ntBASIC13.08□□□□□ -0.32
Sftpa1P35242 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.08□□□□□ -0.32
Sftpa1P35242 Gm27572-201ENSMUST00000183702 255 ntBASIC13.08□□□□□ -0.32
Sftpa1P35242 Gm27847-201ENSMUST00000183711 107 ntBASIC13.08□□□□□ -0.32
Sftpa1P35242 Gm27375-201ENSMUST00000183799 107 ntBASIC13.08□□□□□ -0.32
Sftpa1P35242 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Sftpa1P35242 Gm43094-201ENSMUST00000196549 921 ntBASIC13.08□□□□□ -0.32
Sftpa1P35242 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.08□□□□□ -0.32
Sftpa1P35242 Gm7287-201ENSMUST00000205267 602 ntBASIC13.08□□□□□ -0.32
Sftpa1P35242 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.08□□□□□ -0.32
Sftpa1P35242 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sftpa1P35242 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sftpa1P35242 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sftpa1P35242 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sftpa1P35242 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sftpa1P35242 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sftpa1P35242 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sftpa1P35242 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sftpa1P35242 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sftpa1P35242 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sftpa1P35242 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Sftpa1P35242 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sftpa1P35242 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sftpa1P35242 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sftpa1P35242 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sftpa1P35242 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sftpa1P35242 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Sftpa1P35242 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sftpa1P35242 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Sftpa1P35242 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Sftpa1P35242 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sftpa1P35242 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Sftpa1P35242 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sftpa1P35242 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sftpa1P35242 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sftpa1P35242 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sftpa1P35242 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.07□□□□□ -0.32
Sftpa1P35242 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Sftpa1P35242 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sftpa1P35242 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sftpa1P35242 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sftpa1P35242 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.07□□□□□ -0.32
Sftpa1P35242 Gm15240-201ENSMUST00000118156 720 ntBASIC13.07□□□□□ -0.32
Sftpa1P35242 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.07□□□□□ -0.32
Sftpa1P35242 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.07□□□□□ -0.32
Sftpa1P35242 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.07□□□□□ -0.32
Sftpa1P35242 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Sftpa1P35242 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.07□□□□□ -0.32
Sftpa1P35242 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Sftpa1P35242 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.07□□□□□ -0.32
Sftpa1P35242 Gm43179-201ENSMUST00000198797 275 ntBASIC13.07□□□□□ -0.32
Sftpa1P35242 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.07□□□□□ -0.32
Sftpa1P35242 Gm9257-201ENSMUST00000221254 232 ntBASIC13.07□□□□□ -0.32
Sftpa1P35242 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sftpa1P35242 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Sftpa1P35242 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sftpa1P35242 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sftpa1P35242 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sftpa1P35242 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sftpa1P35242 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sftpa1P35242 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sftpa1P35242 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Sftpa1P35242 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sftpa1P35242 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sftpa1P35242 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sftpa1P35242 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sftpa1P35242 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sftpa1P35242 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.07□□□□□ -0.32
Sftpa1P35242 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sftpa1P35242 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sftpa1P35242 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.07□□□□□ -0.32
Sftpa1P35242 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sftpa1P35242 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sftpa1P35242 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.06□□□□□ -0.32
Sftpa1P35242 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sftpa1P35242 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sftpa1P35242 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC13.06□□□□□ -0.32
Sftpa1P35242 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sftpa1P35242 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sftpa1P35242 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sftpa1P35242 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.06□□□□□ -0.32
Sftpa1P35242 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sftpa1P35242 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sftpa1P35242 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.06□□□□□ -0.32
Sftpa1P35242 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sftpa1P35242 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sftpa1P35242 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sftpa1P35242 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.06□□□□□ -0.32
Sftpa1P35242 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Sftpa1P35242 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.06□□□□□ -0.32
Sftpa1P35242 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.06□□□□□ -0.32
Sftpa1P35242 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sftpa1P35242 AC154171.1-201ENSMUST00000224610 643 ntBASIC13.06□□□□□ -0.32
Sftpa1P35242 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sftpa1P35242 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sftpa1P35242 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms