Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rom1P32958 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rom1P32958 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rom1P32958 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rom1P32958 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC11.25□□□□□ -0.61
Rom1P32958 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rom1P32958 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rom1P32958 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Rom1P32958 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rom1P32958 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rom1P32958 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rom1P32958 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.24□□□□□ -0.61
Rom1P32958 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rom1P32958 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rom1P32958 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.24□□□□□ -0.61
Rom1P32958 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rom1P32958 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rom1P32958 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rom1P32958 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rom1P32958 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Rom1P32958 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rom1P32958 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rom1P32958 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rom1P32958 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rom1P32958 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC11.24□□□□□ -0.61
Rom1P32958 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rom1P32958 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Rom1P32958 Gm12895-201ENSMUST00000122214 226 ntBASIC11.24□□□□□ -0.61
Rom1P32958 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC11.24□□□□□ -0.61
Rom1P32958 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC11.24□□□□□ -0.61
Rom1P32958 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
Rom1P32958 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Rom1P32958 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC11.24□□□□□ -0.61
Rom1P32958 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC11.24□□□□□ -0.61
Rom1P32958 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC11.24□□□□□ -0.61
Rom1P32958 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rom1P32958 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rom1P32958 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Rom1P32958 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rom1P32958 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rom1P32958 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC11.24□□□□□ -0.61
Rom1P32958 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.24□□□□□ -0.61
Rom1P32958 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Rom1P32958 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rom1P32958 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rom1P32958 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rom1P32958 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rom1P32958 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rom1P32958 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.24□□□□□ -0.61
Rom1P32958 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rom1P32958 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rom1P32958 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Rom1P32958 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Rom1P32958 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rom1P32958 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Rom1P32958 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rom1P32958 AC025913.2-201ENSMUST00000220136 1766 ntBASIC11.23□□□□□ -0.61
Rom1P32958 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rom1P32958 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Rom1P32958 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rom1P32958 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Rom1P32958 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rom1P32958 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rom1P32958 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rom1P32958 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rom1P32958 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rom1P32958 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rom1P32958 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC11.23□□□□□ -0.61
Rom1P32958 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Rom1P32958 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Rom1P32958 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC11.23□□□□□ -0.61
Rom1P32958 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC11.23□□□□□ -0.61
Rom1P32958 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC11.23□□□□□ -0.61
Rom1P32958 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rom1P32958 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rom1P32958 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC11.23□□□□□ -0.61
Rom1P32958 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rom1P32958 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rom1P32958 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rom1P32958 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rom1P32958 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Rom1P32958 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Rom1P32958 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC11.23□□□□□ -0.61
Rom1P32958 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rom1P32958 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Rom1P32958 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rom1P32958 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rom1P32958 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rom1P32958 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rom1P32958 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rom1P32958 Il17rd-203ENSMUST00000225146 3366 ntBASIC11.23□□□□□ -0.61
Rom1P32958 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rom1P32958 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rom1P32958 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rom1P32958 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rom1P32958 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rom1P32958 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rom1P32958 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rom1P32958 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rom1P32958 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms