Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vti1aO89116 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vti1aO89116 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Vti1aO89116 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vti1aO89116 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vti1aO89116 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC15.33■□□□□ 0.05
Vti1aO89116 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Vti1aO89116 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Vti1aO89116 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Vti1aO89116 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Vti1aO89116 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vti1aO89116 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vti1aO89116 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vti1aO89116 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Vti1aO89116 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vti1aO89116 Gm4875-201ENSMUST00000118257 786 ntBASIC15.33■□□□□ 0.04
Vti1aO89116 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Vti1aO89116 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC15.33■□□□□ 0.04
Vti1aO89116 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Vti1aO89116 Dupd1-202ENSMUST00000224735 548 ntBASIC15.33■□□□□ 0.04
Vti1aO89116 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vti1aO89116 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Vti1aO89116 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vti1aO89116 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Vti1aO89116 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vti1aO89116 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Vti1aO89116 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vti1aO89116 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Vti1aO89116 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vti1aO89116 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vti1aO89116 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vti1aO89116 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vti1aO89116 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Vti1aO89116 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC15.32■□□□□ 0.04
Vti1aO89116 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Vti1aO89116 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vti1aO89116 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vti1aO89116 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vti1aO89116 Gm8749-201ENSMUST00000117737 331 ntBASIC15.32■□□□□ 0.04
Vti1aO89116 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vti1aO89116 Gm12490-201ENSMUST00000120255 560 ntBASIC15.32■□□□□ 0.04
Vti1aO89116 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vti1aO89116 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC15.32■□□□□ 0.04
Vti1aO89116 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vti1aO89116 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vti1aO89116 Gm9182-201ENSMUST00000217829 639 ntBASIC15.32■□□□□ 0.04
Vti1aO89116 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.32■□□□□ 0.04
Vti1aO89116 Gm16476-201ENSMUST00000221544 139 ntBASIC15.32■□□□□ 0.04
Vti1aO89116 Hist1h2al-201ENSMUST00000091708 339 ntBASIC15.32■□□□□ 0.04
Vti1aO89116 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vti1aO89116 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.32■□□□□ 0.04
Vti1aO89116 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vti1aO89116 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Vti1aO89116 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vti1aO89116 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Vti1aO89116 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vti1aO89116 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Vti1aO89116 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vti1aO89116 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vti1aO89116 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vti1aO89116 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vti1aO89116 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vti1aO89116 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vti1aO89116 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vti1aO89116 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vti1aO89116 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.32■□□□□ 0.04
Vti1aO89116 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vti1aO89116 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Vti1aO89116 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vti1aO89116 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vti1aO89116 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vti1aO89116 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vti1aO89116 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.31■□□□□ 0.04
Vti1aO89116 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC15.31■□□□□ 0.04
Vti1aO89116 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vti1aO89116 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Vti1aO89116 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vti1aO89116 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vti1aO89116 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.31■□□□□ 0.04
Vti1aO89116 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vti1aO89116 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vti1aO89116 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vti1aO89116 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC15.31■□□□□ 0.04
Vti1aO89116 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC15.31■□□□□ 0.04
Vti1aO89116 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vti1aO89116 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.31■□□□□ 0.04
Vti1aO89116 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vti1aO89116 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC15.31■□□□□ 0.04
Vti1aO89116 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vti1aO89116 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vti1aO89116 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vti1aO89116 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vti1aO89116 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vti1aO89116 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vti1aO89116 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vti1aO89116 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vti1aO89116 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vti1aO89116 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC15.3■□□□□ 0.04
Vti1aO89116 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vti1aO89116 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms