Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Gm15590-201ENSMUST00000078419 552 ntBASIC12.69□□□□□ -0.38
CcnkO88874 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CcnkO88874 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CcnkO88874 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.69□□□□□ -0.38
CcnkO88874 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CcnkO88874 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CcnkO88874 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CcnkO88874 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CcnkO88874 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CcnkO88874 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CcnkO88874 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CcnkO88874 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CcnkO88874 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CcnkO88874 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CcnkO88874 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CcnkO88874 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CcnkO88874 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
CcnkO88874 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CcnkO88874 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CcnkO88874 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CcnkO88874 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CcnkO88874 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CcnkO88874 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
CcnkO88874 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CcnkO88874 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CcnkO88874 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CcnkO88874 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CcnkO88874 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CcnkO88874 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CcnkO88874 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.68□□□□□ -0.38
CcnkO88874 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CcnkO88874 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CcnkO88874 Mir5126-201ENSMUST00000175513 77 ntBASIC12.68□□□□□ -0.38
CcnkO88874 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CcnkO88874 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CcnkO88874 AW822252-206ENSMUST00000208904 237 ntBASIC12.68□□□□□ -0.38
CcnkO88874 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC12.68□□□□□ -0.38
CcnkO88874 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CcnkO88874 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CcnkO88874 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CcnkO88874 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CcnkO88874 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CcnkO88874 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CcnkO88874 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CcnkO88874 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CcnkO88874 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CcnkO88874 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CcnkO88874 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CcnkO88874 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CcnkO88874 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CcnkO88874 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CcnkO88874 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CcnkO88874 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CcnkO88874 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CcnkO88874 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CcnkO88874 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CcnkO88874 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CcnkO88874 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CcnkO88874 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
CcnkO88874 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CcnkO88874 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CcnkO88874 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CcnkO88874 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CcnkO88874 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CcnkO88874 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CcnkO88874 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.67□□□□□ -0.38
CcnkO88874 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CcnkO88874 Gm12008-201ENSMUST00000117791 755 ntBASIC12.67□□□□□ -0.38
CcnkO88874 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CcnkO88874 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC12.67□□□□□ -0.38
CcnkO88874 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC12.67□□□□□ -0.38
CcnkO88874 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.67□□□□□ -0.38
CcnkO88874 AC084391.1-201ENSMUST00000200651 141 ntBASIC12.67□□□□□ -0.38
CcnkO88874 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.67□□□□□ -0.38
CcnkO88874 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC12.67□□□□□ -0.38
CcnkO88874 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CcnkO88874 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CcnkO88874 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
CcnkO88874 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CcnkO88874 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
CcnkO88874 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CcnkO88874 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.67□□□□□ -0.38
CcnkO88874 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CcnkO88874 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CcnkO88874 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CcnkO88874 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CcnkO88874 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CcnkO88874 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CcnkO88874 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CcnkO88874 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CcnkO88874 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
CcnkO88874 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CcnkO88874 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CcnkO88874 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CcnkO88874 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CcnkO88874 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CcnkO88874 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CcnkO88874 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CcnkO88874 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.67□□□□□ -0.38
CcnkO88874 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms