Protein–RNA interactions for Protein: O55029

Copb2, Coatomer subunit beta', mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb2O55029 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Copb2O55029 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Copb2O55029 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Copb2O55029 Gm9794-201ENSMUST00000202370 423 ntBASIC16.32■□□□□ 0.2
Copb2O55029 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.32■□□□□ 0.2
Copb2O55029 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Copb2O55029 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC16.32■□□□□ 0.2
Copb2O55029 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC16.32■□□□□ 0.2
Copb2O55029 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Copb2O55029 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Copb2O55029 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Copb2O55029 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Copb2O55029 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Copb2O55029 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Copb2O55029 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Copb2O55029 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Copb2O55029 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Copb2O55029 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Copb2O55029 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Copb2O55029 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Copb2O55029 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Copb2O55029 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Copb2O55029 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC16.32■□□□□ 0.2
Copb2O55029 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Copb2O55029 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.32■□□□□ 0.2
Copb2O55029 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Copb2O55029 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Copb2O55029 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Copb2O55029 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Copb2O55029 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Copb2O55029 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Copb2O55029 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Copb2O55029 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Copb2O55029 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Copb2O55029 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Copb2O55029 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Copb2O55029 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Copb2O55029 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Copb2O55029 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Copb2O55029 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Copb2O55029 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Copb2O55029 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Copb2O55029 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Copb2O55029 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC16.31■□□□□ 0.2
Copb2O55029 Gm31326-201ENSMUST00000191856 1048 ntBASIC16.31■□□□□ 0.2
Copb2O55029 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC16.31■□□□□ 0.2
Copb2O55029 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC16.31■□□□□ 0.2
Copb2O55029 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Copb2O55029 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Copb2O55029 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Copb2O55029 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Copb2O55029 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Copb2O55029 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.31■□□□□ 0.2
Copb2O55029 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Copb2O55029 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Copb2O55029 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC16.31■□□□□ 0.2
Copb2O55029 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Copb2O55029 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Copb2O55029 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Copb2O55029 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Copb2O55029 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Copb2O55029 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Copb2O55029 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Copb2O55029 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Copb2O55029 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Copb2O55029 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Copb2O55029 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Copb2O55029 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Copb2O55029 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Copb2O55029 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC16.3■□□□□ 0.2
Copb2O55029 Gm12490-201ENSMUST00000120255 560 ntBASIC16.3■□□□□ 0.2
Copb2O55029 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC16.3■□□□□ 0.2
Copb2O55029 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Copb2O55029 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Copb2O55029 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC16.3■□□□□ 0.2
Copb2O55029 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC16.3■□□□□ 0.2
Copb2O55029 AC153872.1-201ENSMUST00000199539 128 ntBASIC16.3■□□□□ 0.2
Copb2O55029 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC16.3■□□□□ 0.2
Copb2O55029 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Copb2O55029 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Copb2O55029 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Copb2O55029 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC16.3■□□□□ 0.2
Copb2O55029 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Copb2O55029 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Copb2O55029 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Copb2O55029 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Copb2O55029 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Copb2O55029 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Copb2O55029 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Copb2O55029 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Copb2O55029 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Copb2O55029 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Copb2O55029 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Copb2O55029 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Copb2O55029 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Copb2O55029 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Copb2O55029 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Copb2O55029 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Copb2O55029 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Copb2O55029 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms