Protein–RNA interactions for Protein: O54962

Banf1, Barrier-to-autointegration factor, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Banf1O54962 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.46□□□□□ -0.09
Banf1O54962 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.46□□□□□ -0.09
Banf1O54962 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.46□□□□□ -0.09
Banf1O54962 Gm10275-202ENSMUST00000168697 495 ntBASIC14.46□□□□□ -0.09
Banf1O54962 Gm18733-201ENSMUST00000173950 856 ntBASIC14.46□□□□□ -0.09
Banf1O54962 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.46□□□□□ -0.09
Banf1O54962 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.46□□□□□ -0.09
Banf1O54962 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.46□□□□□ -0.09
Banf1O54962 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Banf1O54962 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.46□□□□□ -0.09
Banf1O54962 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.46□□□□□ -0.09
Banf1O54962 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Banf1O54962 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Banf1O54962 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Banf1O54962 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Banf1O54962 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Banf1O54962 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Banf1O54962 Gm10275-201ENSMUST00000092620 635 ntBASIC14.46□□□□□ -0.09
Banf1O54962 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Banf1O54962 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Banf1O54962 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Banf1O54962 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Banf1O54962 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.46□□□□□ -0.1
Banf1O54962 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Banf1O54962 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Banf1O54962 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Banf1O54962 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Banf1O54962 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
Banf1O54962 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Banf1O54962 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Banf1O54962 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Banf1O54962 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Banf1O54962 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Banf1O54962 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Banf1O54962 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Banf1O54962 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Banf1O54962 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Banf1O54962 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Banf1O54962 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Banf1O54962 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Banf1O54962 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Banf1O54962 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.45□□□□□ -0.1
Banf1O54962 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Banf1O54962 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.45□□□□□ -0.1
Banf1O54962 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Banf1O54962 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Banf1O54962 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Banf1O54962 Gm5364-201ENSMUST00000216789 889 ntBASIC14.45□□□□□ -0.1
Banf1O54962 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Banf1O54962 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.45□□□□□ -0.1
Banf1O54962 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Banf1O54962 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Banf1O54962 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.45□□□□□ -0.1
Banf1O54962 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Banf1O54962 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Banf1O54962 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Banf1O54962 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Banf1O54962 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.45□□□□□ -0.1
Banf1O54962 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Banf1O54962 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Banf1O54962 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Banf1O54962 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Banf1O54962 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Banf1O54962 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.44□□□□□ -0.1
Banf1O54962 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Banf1O54962 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.44□□□□□ -0.1
Banf1O54962 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Banf1O54962 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Banf1O54962 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Banf1O54962 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Banf1O54962 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Banf1O54962 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Banf1O54962 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Banf1O54962 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Banf1O54962 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Banf1O54962 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Banf1O54962 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Banf1O54962 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Banf1O54962 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.44□□□□□ -0.1
Banf1O54962 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.44□□□□□ -0.1
Banf1O54962 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Banf1O54962 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Banf1O54962 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.44□□□□□ -0.1
Banf1O54962 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Banf1O54962 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Banf1O54962 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.44□□□□□ -0.1
Banf1O54962 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Banf1O54962 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Banf1O54962 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.44□□□□□ -0.1
Banf1O54962 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Banf1O54962 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Banf1O54962 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Banf1O54962 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.44□□□□□ -0.1
Banf1O54962 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Banf1O54962 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Banf1O54962 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Banf1O54962 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Banf1O54962 Grk6-205ENSMUST00000224653 2976 ntBASIC14.44□□□□□ -0.1
Banf1O54962 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.44□□□□□ -0.1
Banf1O54962 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms