Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm28043E0CXC2 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Gm28043E0CXC2 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Gm28043E0CXC2 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
Gm28043E0CXC2 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.29□□□□□ -0.12
Gm28043E0CXC2 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Gm28043E0CXC2 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.29□□□□□ -0.12
Gm28043E0CXC2 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm28043E0CXC2 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Gm28043E0CXC2 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm28043E0CXC2 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm28043E0CXC2 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm28043E0CXC2 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm28043E0CXC2 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm28043E0CXC2 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm28043E0CXC2 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Gm28043E0CXC2 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Gm28043E0CXC2 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.28□□□□□ -0.12
Gm28043E0CXC2 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gm28043E0CXC2 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Gm28043E0CXC2 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gm28043E0CXC2 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gm28043E0CXC2 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.28□□□□□ -0.12
Gm28043E0CXC2 Gm17968-201ENSMUST00000194902 784 ntBASIC14.28□□□□□ -0.12
Gm28043E0CXC2 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.28□□□□□ -0.12
Gm28043E0CXC2 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gm28043E0CXC2 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.28□□□□□ -0.12
Gm28043E0CXC2 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm28043E0CXC2 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm28043E0CXC2 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.28□□□□□ -0.12
Gm28043E0CXC2 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm28043E0CXC2 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm28043E0CXC2 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm28043E0CXC2 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm28043E0CXC2 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm28043E0CXC2 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm28043E0CXC2 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm28043E0CXC2 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm28043E0CXC2 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gm28043E0CXC2 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm28043E0CXC2 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Gm28043E0CXC2 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gm28043E0CXC2 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gm28043E0CXC2 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Gm28043E0CXC2 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Gm28043E0CXC2 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Gm28043E0CXC2 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.27□□□□□ -0.12
Gm28043E0CXC2 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.27□□□□□ -0.12
Gm28043E0CXC2 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gm28043E0CXC2 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gm28043E0CXC2 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.27□□□□□ -0.12
Gm28043E0CXC2 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gm28043E0CXC2 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gm28043E0CXC2 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gm28043E0CXC2 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gm28043E0CXC2 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gm28043E0CXC2 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Gm28043E0CXC2 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
Gm28043E0CXC2 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.27□□□□□ -0.13
Gm28043E0CXC2 Gm16198-201ENSMUST00000118766 670 ntBASIC14.27□□□□□ -0.13
Gm28043E0CXC2 Mir3113-201ENSMUST00000175478 76 ntBASIC14.27□□□□□ -0.13
Gm28043E0CXC2 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.27□□□□□ -0.13
Gm28043E0CXC2 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.27□□□□□ -0.13
Gm28043E0CXC2 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.27□□□□□ -0.13
Gm28043E0CXC2 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.27□□□□□ -0.13
Gm28043E0CXC2 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.27□□□□□ -0.13
Gm28043E0CXC2 Gm45747-201ENSMUST00000212203 999 ntBASIC14.27□□□□□ -0.13
Gm28043E0CXC2 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Gm28043E0CXC2 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.27□□□□□ -0.13
Gm28043E0CXC2 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gm28043E0CXC2 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gm28043E0CXC2 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Gm28043E0CXC2 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.27□□□□□ -0.13
Gm28043E0CXC2 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gm28043E0CXC2 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gm28043E0CXC2 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gm28043E0CXC2 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gm28043E0CXC2 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Gm28043E0CXC2 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gm28043E0CXC2 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28043E0CXC2 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.26□□□□□ -0.13
Gm28043E0CXC2 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28043E0CXC2 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28043E0CXC2 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28043E0CXC2 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28043E0CXC2 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.26□□□□□ -0.13
Gm28043E0CXC2 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28043E0CXC2 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28043E0CXC2 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28043E0CXC2 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28043E0CXC2 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.26□□□□□ -0.13
Gm28043E0CXC2 Gm27301-201ENSMUST00000184012 127 ntBASIC14.26□□□□□ -0.13
Gm28043E0CXC2 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.26□□□□□ -0.13
Gm28043E0CXC2 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.26□□□□□ -0.13
Gm28043E0CXC2 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.26□□□□□ -0.13
Gm28043E0CXC2 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.26□□□□□ -0.13
Gm28043E0CXC2 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.26□□□□□ -0.13
Gm28043E0CXC2 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28043E0CXC2 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Gm28043E0CXC2 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms