Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clip3B9EHT4 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clip3B9EHT4 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Clip3B9EHT4 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clip3B9EHT4 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Clip3B9EHT4 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.83□□□□□ -0.2
Clip3B9EHT4 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clip3B9EHT4 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clip3B9EHT4 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.83□□□□□ -0.2
Clip3B9EHT4 Gm13464-201ENSMUST00000119418 935 ntBASIC13.83□□□□□ -0.2
Clip3B9EHT4 Gm5479-201ENSMUST00000160578 435 ntBASIC13.83□□□□□ -0.2
Clip3B9EHT4 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.83□□□□□ -0.2
Clip3B9EHT4 Gm45098-201ENSMUST00000207179 657 ntBASIC13.83□□□□□ -0.2
Clip3B9EHT4 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clip3B9EHT4 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clip3B9EHT4 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clip3B9EHT4 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Clip3B9EHT4 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Clip3B9EHT4 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clip3B9EHT4 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clip3B9EHT4 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.83□□□□□ -0.2
Clip3B9EHT4 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clip3B9EHT4 Gm4780-202ENSMUST00000215200 2644 ntBASIC13.83□□□□□ -0.2
Clip3B9EHT4 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clip3B9EHT4 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clip3B9EHT4 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clip3B9EHT4 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Clip3B9EHT4 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clip3B9EHT4 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.83□□□□□ -0.2
Clip3B9EHT4 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clip3B9EHT4 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clip3B9EHT4 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.83□□□□□ -0.2
Clip3B9EHT4 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clip3B9EHT4 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clip3B9EHT4 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clip3B9EHT4 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clip3B9EHT4 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clip3B9EHT4 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clip3B9EHT4 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clip3B9EHT4 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Clip3B9EHT4 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Clip3B9EHT4 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.82□□□□□ -0.2
Clip3B9EHT4 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Clip3B9EHT4 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clip3B9EHT4 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clip3B9EHT4 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Clip3B9EHT4 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Clip3B9EHT4 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clip3B9EHT4 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
Clip3B9EHT4 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clip3B9EHT4 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Clip3B9EHT4 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Clip3B9EHT4 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.82□□□□□ -0.2
Clip3B9EHT4 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.82□□□□□ -0.2
Clip3B9EHT4 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Clip3B9EHT4 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clip3B9EHT4 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.82□□□□□ -0.2
Clip3B9EHT4 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clip3B9EHT4 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clip3B9EHT4 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clip3B9EHT4 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clip3B9EHT4 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clip3B9EHT4 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clip3B9EHT4 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Clip3B9EHT4 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clip3B9EHT4 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Clip3B9EHT4 Efs-202ENSMUST00000227037 2540 ntBASIC13.82□□□□□ -0.2
Clip3B9EHT4 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clip3B9EHT4 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clip3B9EHT4 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clip3B9EHT4 Gm43321-201ENSMUST00000198897 2409 ntBASIC13.81□□□□□ -0.2
Clip3B9EHT4 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.81□□□□□ -0.2
Clip3B9EHT4 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clip3B9EHT4 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clip3B9EHT4 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Clip3B9EHT4 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Clip3B9EHT4 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.81□□□□□ -0.2
Clip3B9EHT4 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clip3B9EHT4 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clip3B9EHT4 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.81□□□□□ -0.2
Clip3B9EHT4 Gm9726-201ENSMUST00000180321 678 ntBASIC13.81□□□□□ -0.2
Clip3B9EHT4 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clip3B9EHT4 Gm17837-201ENSMUST00000186435 985 ntBASIC13.81□□□□□ -0.2
Clip3B9EHT4 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.81□□□□□ -0.2
Clip3B9EHT4 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.81□□□□□ -0.2
Clip3B9EHT4 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Clip3B9EHT4 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clip3B9EHT4 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clip3B9EHT4 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clip3B9EHT4 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clip3B9EHT4 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clip3B9EHT4 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clip3B9EHT4 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.81□□□□□ -0.2
Clip3B9EHT4 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clip3B9EHT4 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clip3B9EHT4 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clip3B9EHT4 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clip3B9EHT4 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Clip3B9EHT4 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Clip3B9EHT4 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms