Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a4A2AX52 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a4A2AX52 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a4A2AX52 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a4A2AX52 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a4A2AX52 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a4A2AX52 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a4A2AX52 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC11.98□□□□□ -0.49
Col6a4A2AX52 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a4A2AX52 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a4A2AX52 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a4A2AX52 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Col6a4A2AX52 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a4A2AX52 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a4A2AX52 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a4A2AX52 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.98□□□□□ -0.49
Col6a4A2AX52 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC11.98□□□□□ -0.49
Col6a4A2AX52 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a4A2AX52 AC155286.1-201ENSMUST00000218632 448 ntBASIC11.98□□□□□ -0.49
Col6a4A2AX52 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a4A2AX52 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a4A2AX52 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a4A2AX52 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a4A2AX52 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a4A2AX52 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a4A2AX52 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a4A2AX52 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a4A2AX52 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a4A2AX52 Mmp14-206ENSMUST00000225641 3238 ntBASIC11.97□□□□□ -0.49
Col6a4A2AX52 AC093043.3-201ENSMUST00000226531 2273 ntBASIC11.97□□□□□ -0.49
Col6a4A2AX52 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a4A2AX52 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC11.97□□□□□ -0.49
Col6a4A2AX52 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC11.97□□□□□ -0.49
Col6a4A2AX52 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Col6a4A2AX52 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Col6a4A2AX52 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a4A2AX52 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a4A2AX52 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a4A2AX52 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a4A2AX52 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a4A2AX52 Gm15393-201ENSMUST00000120499 219 ntBASIC11.97□□□□□ -0.49
Col6a4A2AX52 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC11.97□□□□□ -0.49
Col6a4A2AX52 Gm27847-201ENSMUST00000183711 107 ntBASIC11.97□□□□□ -0.49
Col6a4A2AX52 Gm27375-201ENSMUST00000183799 107 ntBASIC11.97□□□□□ -0.49
Col6a4A2AX52 Gm28911-201ENSMUST00000188837 117 ntBASIC11.97□□□□□ -0.49
Col6a4A2AX52 Gm17795-201ENSMUST00000214505 757 ntBASIC11.97□□□□□ -0.49
Col6a4A2AX52 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Col6a4A2AX52 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a4A2AX52 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Col6a4A2AX52 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Col6a4A2AX52 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a4A2AX52 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a4A2AX52 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a4A2AX52 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a4A2AX52 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a4A2AX52 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a4A2AX52 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a4A2AX52 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a4A2AX52 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a4A2AX52 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.97□□□□□ -0.49
Col6a4A2AX52 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a4A2AX52 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a4A2AX52 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a4A2AX52 Gm15236-201ENSMUST00000117309 379 ntBASIC11.97□□□□□ -0.49
Col6a4A2AX52 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Col6a4A2AX52 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Col6a4A2AX52 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.97□□□□□ -0.49
Col6a4A2AX52 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a4A2AX52 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Col6a4A2AX52 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Col6a4A2AX52 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a4A2AX52 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a4A2AX52 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a4A2AX52 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a4A2AX52 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a4A2AX52 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Col6a4A2AX52 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC11.96□□□□□ -0.49
Col6a4A2AX52 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Col6a4A2AX52 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a4A2AX52 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a4A2AX52 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a4A2AX52 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a4A2AX52 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a4A2AX52 Gm45412-201ENSMUST00000210217 2275 ntBASIC11.96□□□□□ -0.49
Col6a4A2AX52 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a4A2AX52 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a4A2AX52 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a4A2AX52 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.96□□□□□ -0.49
Col6a4A2AX52 Gm11524-201ENSMUST00000119349 807 ntBASIC11.96□□□□□ -0.49
Col6a4A2AX52 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.96□□□□□ -0.49
Col6a4A2AX52 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.96□□□□□ -0.49
Col6a4A2AX52 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a4A2AX52 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a4A2AX52 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a4A2AX52 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col6a4A2AX52 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col6a4A2AX52 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col6a4A2AX52 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col6a4A2AX52 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col6a4A2AX52 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms