Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Scn1aA2APX8 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Scn1aA2APX8 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scn1aA2APX8 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Scn1aA2APX8 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Scn1aA2APX8 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.83□□□□□ -0.04
Scn1aA2APX8 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Scn1aA2APX8 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.83□□□□□ -0.04
Scn1aA2APX8 Gm29741-201ENSMUST00000192667 421 ntBASIC14.83□□□□□ -0.04
Scn1aA2APX8 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.83□□□□□ -0.04
Scn1aA2APX8 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.83□□□□□ -0.04
Scn1aA2APX8 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Scn1aA2APX8 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scn1aA2APX8 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Scn1aA2APX8 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.83□□□□□ -0.04
Scn1aA2APX8 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Scn1aA2APX8 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scn1aA2APX8 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scn1aA2APX8 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scn1aA2APX8 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Scn1aA2APX8 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scn1aA2APX8 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Scn1aA2APX8 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.82□□□□□ -0.04
Scn1aA2APX8 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.82□□□□□ -0.04
Scn1aA2APX8 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn1aA2APX8 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn1aA2APX8 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Scn1aA2APX8 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.82□□□□□ -0.04
Scn1aA2APX8 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn1aA2APX8 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn1aA2APX8 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn1aA2APX8 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Scn1aA2APX8 Gm5354-201ENSMUST00000182417 973 ntBASIC14.82□□□□□ -0.04
Scn1aA2APX8 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn1aA2APX8 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.82□□□□□ -0.04
Scn1aA2APX8 Gm45668-201ENSMUST00000211271 493 ntBASIC14.82□□□□□ -0.04
Scn1aA2APX8 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.82□□□□□ -0.04
Scn1aA2APX8 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn1aA2APX8 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Scn1aA2APX8 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Scn1aA2APX8 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn1aA2APX8 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Scn1aA2APX8 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn1aA2APX8 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Scn1aA2APX8 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn1aA2APX8 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn1aA2APX8 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn1aA2APX8 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn1aA2APX8 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn1aA2APX8 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn1aA2APX8 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn1aA2APX8 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn1aA2APX8 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn1aA2APX8 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn1aA2APX8 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Scn1aA2APX8 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn1aA2APX8 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Scn1aA2APX8 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn1aA2APX8 Gm15678-201ENSMUST00000117573 960 ntBASIC14.82□□□□□ -0.04
Scn1aA2APX8 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.82□□□□□ -0.04
Scn1aA2APX8 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Scn1aA2APX8 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn1aA2APX8 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn1aA2APX8 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn1aA2APX8 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Scn1aA2APX8 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Scn1aA2APX8 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn1aA2APX8 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn1aA2APX8 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn1aA2APX8 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn1aA2APX8 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn1aA2APX8 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn1aA2APX8 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
Scn1aA2APX8 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
Scn1aA2APX8 Gm11524-201ENSMUST00000119349 807 ntBASIC14.81□□□□□ -0.04
Scn1aA2APX8 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Scn1aA2APX8 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.81□□□□□ -0.04
Scn1aA2APX8 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn1aA2APX8 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn1aA2APX8 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn1aA2APX8 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn1aA2APX8 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn1aA2APX8 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn1aA2APX8 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Scn1aA2APX8 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Scn1aA2APX8 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn1aA2APX8 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.81□□□□□ -0.04
Scn1aA2APX8 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn1aA2APX8 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn1aA2APX8 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scn1aA2APX8 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn1aA2APX8 Gm15240-201ENSMUST00000118156 720 ntBASIC14.8□□□□□ -0.04
Scn1aA2APX8 Gm13385-201ENSMUST00000121089 220 ntBASIC14.8□□□□□ -0.04
Scn1aA2APX8 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scn1aA2APX8 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.8□□□□□ -0.04
Scn1aA2APX8 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.8□□□□□ -0.04
Scn1aA2APX8 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.8□□□□□ -0.04
Scn1aA2APX8 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn1aA2APX8 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn1aA2APX8 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms