Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lnp1A0A1B0GSK3 Gm27702-201ENSMUST00000184512 56 ntBASIC11.85□□□□□ -0.51
Lnp1A0A1B0GSK3 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC11.85□□□□□ -0.51
Lnp1A0A1B0GSK3 Gm43125-201ENSMUST00000201724 730 ntBASIC11.85□□□□□ -0.51
Lnp1A0A1B0GSK3 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC11.85□□□□□ -0.51
Lnp1A0A1B0GSK3 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lnp1A0A1B0GSK3 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC11.85□□□□□ -0.51
Lnp1A0A1B0GSK3 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lnp1A0A1B0GSK3 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lnp1A0A1B0GSK3 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lnp1A0A1B0GSK3 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lnp1A0A1B0GSK3 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lnp1A0A1B0GSK3 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Lnp1A0A1B0GSK3 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lnp1A0A1B0GSK3 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lnp1A0A1B0GSK3 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lnp1A0A1B0GSK3 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lnp1A0A1B0GSK3 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Lnp1A0A1B0GSK3 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Lnp1A0A1B0GSK3 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lnp1A0A1B0GSK3 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Lnp1A0A1B0GSK3 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC11.84□□□□□ -0.51
Lnp1A0A1B0GSK3 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lnp1A0A1B0GSK3 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lnp1A0A1B0GSK3 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lnp1A0A1B0GSK3 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lnp1A0A1B0GSK3 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Lnp1A0A1B0GSK3 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lnp1A0A1B0GSK3 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lnp1A0A1B0GSK3 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lnp1A0A1B0GSK3 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lnp1A0A1B0GSK3 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lnp1A0A1B0GSK3 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lnp1A0A1B0GSK3 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Lnp1A0A1B0GSK3 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lnp1A0A1B0GSK3 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC11.84□□□□□ -0.51
Lnp1A0A1B0GSK3 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC11.84□□□□□ -0.51
Lnp1A0A1B0GSK3 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC11.84□□□□□ -0.51
Lnp1A0A1B0GSK3 Gm10275-202ENSMUST00000168697 495 ntBASIC11.84□□□□□ -0.51
Lnp1A0A1B0GSK3 Gm18737-201ENSMUST00000173594 937 ntBASIC11.84□□□□□ -0.51
Lnp1A0A1B0GSK3 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC11.84□□□□□ -0.51
Lnp1A0A1B0GSK3 AC158529.1-201ENSMUST00000223618 239 ntBASIC11.84□□□□□ -0.51
Lnp1A0A1B0GSK3 Chchd1-203ENSMUST00000224633 557 ntBASIC11.84□□□□□ -0.51
Lnp1A0A1B0GSK3 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lnp1A0A1B0GSK3 Gm10275-201ENSMUST00000092620 635 ntBASIC11.84□□□□□ -0.51
Lnp1A0A1B0GSK3 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lnp1A0A1B0GSK3 AC167013.2-201ENSMUST00000228520 2684 ntBASIC11.84□□□□□ -0.51
Lnp1A0A1B0GSK3 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lnp1A0A1B0GSK3 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lnp1A0A1B0GSK3 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lnp1A0A1B0GSK3 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lnp1A0A1B0GSK3 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lnp1A0A1B0GSK3 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lnp1A0A1B0GSK3 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lnp1A0A1B0GSK3 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Lnp1A0A1B0GSK3 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
Lnp1A0A1B0GSK3 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Lnp1A0A1B0GSK3 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Lnp1A0A1B0GSK3 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Lnp1A0A1B0GSK3 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC11.83□□□□□ -0.52
Lnp1A0A1B0GSK3 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lnp1A0A1B0GSK3 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lnp1A0A1B0GSK3 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Lnp1A0A1B0GSK3 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lnp1A0A1B0GSK3 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lnp1A0A1B0GSK3 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Lnp1A0A1B0GSK3 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lnp1A0A1B0GSK3 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Lnp1A0A1B0GSK3 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lnp1A0A1B0GSK3 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lnp1A0A1B0GSK3 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lnp1A0A1B0GSK3 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lnp1A0A1B0GSK3 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lnp1A0A1B0GSK3 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lnp1A0A1B0GSK3 Gm13015-201ENSMUST00000118674 204 ntBASIC11.83□□□□□ -0.52
Lnp1A0A1B0GSK3 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC11.83□□□□□ -0.52
Lnp1A0A1B0GSK3 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Lnp1A0A1B0GSK3 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC11.83□□□□□ -0.52
Lnp1A0A1B0GSK3 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC11.83□□□□□ -0.52
Lnp1A0A1B0GSK3 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lnp1A0A1B0GSK3 Gm43474-201ENSMUST00000196415 774 ntBASIC11.83□□□□□ -0.52
Lnp1A0A1B0GSK3 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lnp1A0A1B0GSK3 AC151286.1-201ENSMUST00000198489 145 ntBASIC11.83□□□□□ -0.52
Lnp1A0A1B0GSK3 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lnp1A0A1B0GSK3 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Lnp1A0A1B0GSK3 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lnp1A0A1B0GSK3 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lnp1A0A1B0GSK3 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Lnp1A0A1B0GSK3 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lnp1A0A1B0GSK3 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lnp1A0A1B0GSK3 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC11.83□□□□□ -0.52
Lnp1A0A1B0GSK3 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lnp1A0A1B0GSK3 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lnp1A0A1B0GSK3 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lnp1A0A1B0GSK3 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Lnp1A0A1B0GSK3 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.83□□□□□ -0.52
Lnp1A0A1B0GSK3 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lnp1A0A1B0GSK3 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.83□□□□□ -0.52
Lnp1A0A1B0GSK3 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lnp1A0A1B0GSK3 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms