Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv29A0A0G2LB96 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv29A0A0G2LB96 Gm5864-201ENSMUST00000202263 970 ntBASIC11.82□□□□□ -0.52
Trbv29A0A0G2LB96 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv29A0A0G2LB96 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv29A0A0G2LB96 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv29A0A0G2LB96 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC11.82□□□□□ -0.52
Trbv29A0A0G2LB96 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Trbv29A0A0G2LB96 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC11.82□□□□□ -0.52
Trbv29A0A0G2LB96 Gm15889-202ENSMUST00000212669 2443 ntBASIC11.82□□□□□ -0.52
Trbv29A0A0G2LB96 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv29A0A0G2LB96 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trbv29A0A0G2LB96 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv29A0A0G2LB96 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv29A0A0G2LB96 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv29A0A0G2LB96 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv29A0A0G2LB96 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trbv29A0A0G2LB96 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trbv29A0A0G2LB96 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv29A0A0G2LB96 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv29A0A0G2LB96 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv29A0A0G2LB96 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv29A0A0G2LB96 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv29A0A0G2LB96 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv29A0A0G2LB96 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv29A0A0G2LB96 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv29A0A0G2LB96 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv29A0A0G2LB96 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Trbv29A0A0G2LB96 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv29A0A0G2LB96 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv29A0A0G2LB96 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv29A0A0G2LB96 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv29A0A0G2LB96 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv29A0A0G2LB96 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv29A0A0G2LB96 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv29A0A0G2LB96 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv29A0A0G2LB96 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv29A0A0G2LB96 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv29A0A0G2LB96 Gm18244-201ENSMUST00000219747 1566 ntBASIC11.81□□□□□ -0.52
Trbv29A0A0G2LB96 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv29A0A0G2LB96 Gm13410-201ENSMUST00000117058 1415 ntBASIC11.81□□□□□ -0.52
Trbv29A0A0G2LB96 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv29A0A0G2LB96 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv29A0A0G2LB96 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trbv29A0A0G2LB96 Gm13884-201ENSMUST00000118103 829 ntBASIC11.81□□□□□ -0.52
Trbv29A0A0G2LB96 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC11.81□□□□□ -0.52
Trbv29A0A0G2LB96 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv29A0A0G2LB96 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trbv29A0A0G2LB96 Gm27301-201ENSMUST00000184012 127 ntBASIC11.81□□□□□ -0.52
Trbv29A0A0G2LB96 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv29A0A0G2LB96 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv29A0A0G2LB96 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trbv29A0A0G2LB96 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv29A0A0G2LB96 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv29A0A0G2LB96 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv29A0A0G2LB96 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trbv29A0A0G2LB96 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trbv29A0A0G2LB96 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv29A0A0G2LB96 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv29A0A0G2LB96 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Trbv29A0A0G2LB96 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv29A0A0G2LB96 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.81□□□□□ -0.52
Trbv29A0A0G2LB96 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv29A0A0G2LB96 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv29A0A0G2LB96 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv29A0A0G2LB96 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv29A0A0G2LB96 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trbv29A0A0G2LB96 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv29A0A0G2LB96 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv29A0A0G2LB96 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trbv29A0A0G2LB96 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv29A0A0G2LB96 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv29A0A0G2LB96 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv29A0A0G2LB96 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv29A0A0G2LB96 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv29A0A0G2LB96 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv29A0A0G2LB96 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC11.8□□□□□ -0.52
Trbv29A0A0G2LB96 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC11.8□□□□□ -0.52
Trbv29A0A0G2LB96 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trbv29A0A0G2LB96 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv29A0A0G2LB96 Mir5131-201ENSMUST00000175426 93 ntBASIC11.8□□□□□ -0.52
Trbv29A0A0G2LB96 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv29A0A0G2LB96 Gm28659-201ENSMUST00000188013 759 ntBASIC11.8□□□□□ -0.52
Trbv29A0A0G2LB96 Gm17971-201ENSMUST00000190239 806 ntBASIC11.8□□□□□ -0.52
Trbv29A0A0G2LB96 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv29A0A0G2LB96 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC11.8□□□□□ -0.52
Trbv29A0A0G2LB96 AC131690.1-201ENSMUST00000218406 374 ntBASIC11.8□□□□□ -0.52
Trbv29A0A0G2LB96 AC123645.1-201ENSMUST00000228469 605 ntBASIC11.8□□□□□ -0.52
Trbv29A0A0G2LB96 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv29A0A0G2LB96 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC11.8□□□□□ -0.52
Trbv29A0A0G2LB96 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv29A0A0G2LB96 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv29A0A0G2LB96 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trbv29A0A0G2LB96 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv29A0A0G2LB96 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trbv29A0A0G2LB96 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv29A0A0G2LB96 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv29A0A0G2LB96 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Trbv29A0A0G2LB96 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trbv29A0A0G2LB96 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms