Protein–RNA interactions for Protein: Q9Z2V6

Hdac5, Histone deacetylase 5, mousemouse

Predictions only

Length 1,113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac5Q9Z2V6 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Hdac5Q9Z2V6 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC20.34■□□□□ 0.85
Hdac5Q9Z2V6 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC20.34■□□□□ 0.85
Hdac5Q9Z2V6 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC20.34■□□□□ 0.85
Hdac5Q9Z2V6 AC139580.1-202ENSMUST00000223574 928 ntBASIC20.34■□□□□ 0.85
Hdac5Q9Z2V6 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hdac5Q9Z2V6 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Hdac5Q9Z2V6 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Hdac5Q9Z2V6 Gm14452-201ENSMUST00000118680 1632 ntBASIC20.34■□□□□ 0.85
Hdac5Q9Z2V6 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC20.34■□□□□ 0.85
Hdac5Q9Z2V6 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC20.34■□□□□ 0.85
Hdac5Q9Z2V6 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Hdac5Q9Z2V6 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC20.34■□□□□ 0.85
Hdac5Q9Z2V6 Gm37305-201ENSMUST00000195714 4279 ntBASIC20.33■□□□□ 0.85
Hdac5Q9Z2V6 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hdac5Q9Z2V6 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC20.33■□□□□ 0.85
Hdac5Q9Z2V6 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hdac5Q9Z2V6 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hdac5Q9Z2V6 Gm9115-201ENSMUST00000120192 1348 ntBASIC20.33■□□□□ 0.85
Hdac5Q9Z2V6 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC20.33■□□□□ 0.85
Hdac5Q9Z2V6 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC20.33■□□□□ 0.85
Hdac5Q9Z2V6 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC20.33■□□□□ 0.85
Hdac5Q9Z2V6 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hdac5Q9Z2V6 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hdac5Q9Z2V6 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC20.33■□□□□ 0.85
Hdac5Q9Z2V6 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
Hdac5Q9Z2V6 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Hdac5Q9Z2V6 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC20.33■□□□□ 0.85
Hdac5Q9Z2V6 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Hdac5Q9Z2V6 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Hdac5Q9Z2V6 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hdac5Q9Z2V6 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hdac5Q9Z2V6 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hdac5Q9Z2V6 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hdac5Q9Z2V6 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hdac5Q9Z2V6 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hdac5Q9Z2V6 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hdac5Q9Z2V6 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.84
Hdac5Q9Z2V6 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hdac5Q9Z2V6 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hdac5Q9Z2V6 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC20.32■□□□□ 0.84
Hdac5Q9Z2V6 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hdac5Q9Z2V6 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Hdac5Q9Z2V6 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hdac5Q9Z2V6 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hdac5Q9Z2V6 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC20.32■□□□□ 0.84
Hdac5Q9Z2V6 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hdac5Q9Z2V6 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hdac5Q9Z2V6 Gm6912-201ENSMUST00000117218 544 ntBASIC20.32■□□□□ 0.84
Hdac5Q9Z2V6 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC20.32■□□□□ 0.84
Hdac5Q9Z2V6 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hdac5Q9Z2V6 Gm18027-201ENSMUST00000218947 619 ntBASIC20.32■□□□□ 0.84
Hdac5Q9Z2V6 Gm18624-201ENSMUST00000220966 658 ntBASIC20.32■□□□□ 0.84
Hdac5Q9Z2V6 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hdac5Q9Z2V6 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC20.32■□□□□ 0.84
Hdac5Q9Z2V6 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hdac5Q9Z2V6 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hdac5Q9Z2V6 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hdac5Q9Z2V6 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hdac5Q9Z2V6 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Hdac5Q9Z2V6 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hdac5Q9Z2V6 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hdac5Q9Z2V6 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hdac5Q9Z2V6 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hdac5Q9Z2V6 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Hdac5Q9Z2V6 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hdac5Q9Z2V6 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC20.31■□□□□ 0.84
Hdac5Q9Z2V6 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Hdac5Q9Z2V6 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hdac5Q9Z2V6 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Hdac5Q9Z2V6 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Hdac5Q9Z2V6 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC20.31■□□□□ 0.84
Hdac5Q9Z2V6 Gm37714-201ENSMUST00000194742 342 ntBASIC20.31■□□□□ 0.84
Hdac5Q9Z2V6 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Hdac5Q9Z2V6 AC155286.1-201ENSMUST00000218632 448 ntBASIC20.31■□□□□ 0.84
Hdac5Q9Z2V6 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Hdac5Q9Z2V6 Gm6180-201ENSMUST00000065243 498 ntBASIC20.31■□□□□ 0.84
Hdac5Q9Z2V6 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Hdac5Q9Z2V6 AC166574.6-201ENSMUST00000227889 1806 ntBASIC20.31■□□□□ 0.84
Hdac5Q9Z2V6 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Hdac5Q9Z2V6 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hdac5Q9Z2V6 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Hdac5Q9Z2V6 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hdac5Q9Z2V6 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hdac5Q9Z2V6 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hdac5Q9Z2V6 Gm42632-201ENSMUST00000201707 2411 ntBASIC20.31■□□□□ 0.84
Hdac5Q9Z2V6 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hdac5Q9Z2V6 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC20.3■□□□□ 0.84
Hdac5Q9Z2V6 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hdac5Q9Z2V6 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
Hdac5Q9Z2V6 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Hdac5Q9Z2V6 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC20.3■□□□□ 0.84
Hdac5Q9Z2V6 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC20.3■□□□□ 0.84
Hdac5Q9Z2V6 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Hdac5Q9Z2V6 Gm7653-201ENSMUST00000214567 508 ntBASIC20.3■□□□□ 0.84
Hdac5Q9Z2V6 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hdac5Q9Z2V6 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hdac5Q9Z2V6 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hdac5Q9Z2V6 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hdac5Q9Z2V6 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms