Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Gm44335-201ENSMUST00000196879 141 ntBASIC15.7■□□□□ 0.1
Prpf40aQ9R1C7 Gm44297-201ENSMUST00000198304 141 ntBASIC15.7■□□□□ 0.1
Prpf40aQ9R1C7 Gm44346-201ENSMUST00000198851 141 ntBASIC15.7■□□□□ 0.1
Prpf40aQ9R1C7 Gm43125-201ENSMUST00000201724 730 ntBASIC15.7■□□□□ 0.1
Prpf40aQ9R1C7 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.7■□□□□ 0.1
Prpf40aQ9R1C7 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC15.7■□□□□ 0.1
Prpf40aQ9R1C7 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf40aQ9R1C7 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf40aQ9R1C7 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC15.7■□□□□ 0.1
Prpf40aQ9R1C7 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf40aQ9R1C7 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf40aQ9R1C7 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf40aQ9R1C7 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf40aQ9R1C7 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf40aQ9R1C7 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf40aQ9R1C7 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf40aQ9R1C7 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf40aQ9R1C7 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC15.7■□□□□ 0.1
Prpf40aQ9R1C7 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf40aQ9R1C7 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf40aQ9R1C7 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Prpf40aQ9R1C7 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf40aQ9R1C7 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf40aQ9R1C7 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Prpf40aQ9R1C7 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf40aQ9R1C7 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf40aQ9R1C7 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf40aQ9R1C7 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf40aQ9R1C7 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf40aQ9R1C7 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Prpf40aQ9R1C7 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Prpf40aQ9R1C7 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf40aQ9R1C7 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf40aQ9R1C7 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf40aQ9R1C7 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf40aQ9R1C7 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.69■□□□□ 0.1
Prpf40aQ9R1C7 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf40aQ9R1C7 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf40aQ9R1C7 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.69■□□□□ 0.1
Prpf40aQ9R1C7 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf40aQ9R1C7 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf40aQ9R1C7 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf40aQ9R1C7 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf40aQ9R1C7 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf40aQ9R1C7 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf40aQ9R1C7 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Prpf40aQ9R1C7 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf40aQ9R1C7 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf40aQ9R1C7 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf40aQ9R1C7 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf40aQ9R1C7 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Prpf40aQ9R1C7 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf40aQ9R1C7 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf40aQ9R1C7 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf40aQ9R1C7 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf40aQ9R1C7 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC15.68■□□□□ 0.1
Prpf40aQ9R1C7 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC15.68■□□□□ 0.1
Prpf40aQ9R1C7 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Prpf40aQ9R1C7 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf40aQ9R1C7 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf40aQ9R1C7 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Prpf40aQ9R1C7 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf40aQ9R1C7 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf40aQ9R1C7 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf40aQ9R1C7 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf40aQ9R1C7 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.68■□□□□ 0.1
Prpf40aQ9R1C7 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC15.68■□□□□ 0.1
Prpf40aQ9R1C7 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.68■□□□□ 0.1
Prpf40aQ9R1C7 Gm37230-201ENSMUST00000194491 818 ntBASIC15.68■□□□□ 0.1
Prpf40aQ9R1C7 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.68■□□□□ 0.1
Prpf40aQ9R1C7 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.68■□□□□ 0.1
Prpf40aQ9R1C7 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf40aQ9R1C7 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf40aQ9R1C7 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf40aQ9R1C7 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf40aQ9R1C7 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf40aQ9R1C7 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf40aQ9R1C7 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf40aQ9R1C7 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf40aQ9R1C7 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf40aQ9R1C7 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf40aQ9R1C7 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf40aQ9R1C7 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Prpf40aQ9R1C7 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf40aQ9R1C7 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf40aQ9R1C7 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Prpf40aQ9R1C7 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf40aQ9R1C7 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf40aQ9R1C7 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf40aQ9R1C7 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf40aQ9R1C7 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf40aQ9R1C7 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf40aQ9R1C7 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf40aQ9R1C7 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf40aQ9R1C7 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf40aQ9R1C7 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Prpf40aQ9R1C7 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf40aQ9R1C7 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf40aQ9R1C7 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.67■□□□□ 0.1
Prpf40aQ9R1C7 Gm43474-201ENSMUST00000196415 774 ntBASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms