Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Crlf1Q9JM58 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Crlf1Q9JM58 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Crlf1Q9JM58 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Crlf1Q9JM58 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Crlf1Q9JM58 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Crlf1Q9JM58 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.37□□□□□ -0.59
Crlf1Q9JM58 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Crlf1Q9JM58 Gm15808-201ENSMUST00000119046 604 ntBASIC11.37□□□□□ -0.59
Crlf1Q9JM58 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC11.37□□□□□ -0.59
Crlf1Q9JM58 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Crlf1Q9JM58 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.37□□□□□ -0.59
Crlf1Q9JM58 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.37□□□□□ -0.59
Crlf1Q9JM58 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Crlf1Q9JM58 Gm9823-201ENSMUST00000051212 327 ntBASIC11.37□□□□□ -0.59
Crlf1Q9JM58 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Crlf1Q9JM58 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Crlf1Q9JM58 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Crlf1Q9JM58 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Crlf1Q9JM58 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC11.37□□□□□ -0.59
Crlf1Q9JM58 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC11.37□□□□□ -0.59
Crlf1Q9JM58 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Crlf1Q9JM58 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Crlf1Q9JM58 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Crlf1Q9JM58 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Crlf1Q9JM58 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.37□□□□□ -0.59
Crlf1Q9JM58 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Crlf1Q9JM58 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Crlf1Q9JM58 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Crlf1Q9JM58 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Crlf1Q9JM58 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Crlf1Q9JM58 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Crlf1Q9JM58 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Crlf1Q9JM58 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Crlf1Q9JM58 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Crlf1Q9JM58 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Crlf1Q9JM58 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Crlf1Q9JM58 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Crlf1Q9JM58 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC11.36□□□□□ -0.59
Crlf1Q9JM58 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Crlf1Q9JM58 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Crlf1Q9JM58 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Crlf1Q9JM58 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Crlf1Q9JM58 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Crlf1Q9JM58 Sybu-209ENSMUST00000228639 4113 ntBASIC11.36□□□□□ -0.59
Crlf1Q9JM58 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Crlf1Q9JM58 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC11.36□□□□□ -0.59
Crlf1Q9JM58 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Crlf1Q9JM58 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Crlf1Q9JM58 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Crlf1Q9JM58 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Crlf1Q9JM58 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.36□□□□□ -0.59
Crlf1Q9JM58 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC11.36□□□□□ -0.59
Crlf1Q9JM58 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Crlf1Q9JM58 Mir877-201ENSMUST00000104738 85 ntBASIC11.36□□□□□ -0.59
Crlf1Q9JM58 Gm15371-201ENSMUST00000117057 784 ntBASIC11.36□□□□□ -0.59
Crlf1Q9JM58 Gm16177-201ENSMUST00000120728 718 ntBASIC11.36□□□□□ -0.59
Crlf1Q9JM58 Gm22331-201ENSMUST00000158066 136 ntBASIC11.36□□□□□ -0.59
Crlf1Q9JM58 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Crlf1Q9JM58 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Crlf1Q9JM58 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.36□□□□□ -0.59
Crlf1Q9JM58 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Crlf1Q9JM58 Gm27501-201ENSMUST00000183599 107 ntBASIC11.36□□□□□ -0.59
Crlf1Q9JM58 Gm27516-201ENSMUST00000184237 98 ntBASIC11.36□□□□□ -0.59
Crlf1Q9JM58 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Crlf1Q9JM58 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.36□□□□□ -0.59
Crlf1Q9JM58 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Crlf1Q9JM58 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.36□□□□□ -0.59
Crlf1Q9JM58 Gm6983-201ENSMUST00000214912 628 ntBASIC11.36□□□□□ -0.59
Crlf1Q9JM58 Mettl6-204ENSMUST00000227595 1027 ntBASIC11.36□□□□□ -0.59
Crlf1Q9JM58 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Crlf1Q9JM58 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Crlf1Q9JM58 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Crlf1Q9JM58 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Crlf1Q9JM58 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.36□□□□□ -0.59
Crlf1Q9JM58 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.36□□□□□ -0.59
Crlf1Q9JM58 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Crlf1Q9JM58 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Crlf1Q9JM58 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Crlf1Q9JM58 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Crlf1Q9JM58 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Crlf1Q9JM58 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Crlf1Q9JM58 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Crlf1Q9JM58 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Crlf1Q9JM58 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Crlf1Q9JM58 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Crlf1Q9JM58 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC11.35□□□□□ -0.59
Crlf1Q9JM58 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Crlf1Q9JM58 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Crlf1Q9JM58 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Crlf1Q9JM58 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Crlf1Q9JM58 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Crlf1Q9JM58 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Crlf1Q9JM58 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Crlf1Q9JM58 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Crlf1Q9JM58 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Crlf1Q9JM58 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
Crlf1Q9JM58 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Crlf1Q9JM58 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Crlf1Q9JM58 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms