Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.86□□□□□ -0.35
Sec61a2Q9JLR1 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sec61a2Q9JLR1 Gm11025-201ENSMUST00000140773 466 ntBASIC12.86□□□□□ -0.35
Sec61a2Q9JLR1 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sec61a2Q9JLR1 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sec61a2Q9JLR1 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.86□□□□□ -0.35
Sec61a2Q9JLR1 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Sec61a2Q9JLR1 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sec61a2Q9JLR1 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sec61a2Q9JLR1 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sec61a2Q9JLR1 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sec61a2Q9JLR1 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.86□□□□□ -0.35
Sec61a2Q9JLR1 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.86□□□□□ -0.35
Sec61a2Q9JLR1 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sec61a2Q9JLR1 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sec61a2Q9JLR1 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Sec61a2Q9JLR1 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sec61a2Q9JLR1 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Sec61a2Q9JLR1 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.86□□□□□ -0.35
Sec61a2Q9JLR1 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sec61a2Q9JLR1 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sec61a2Q9JLR1 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Sec61a2Q9JLR1 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Sec61a2Q9JLR1 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sec61a2Q9JLR1 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.86□□□□□ -0.35
Sec61a2Q9JLR1 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sec61a2Q9JLR1 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sec61a2Q9JLR1 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sec61a2Q9JLR1 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sec61a2Q9JLR1 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sec61a2Q9JLR1 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sec61a2Q9JLR1 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Sec61a2Q9JLR1 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sec61a2Q9JLR1 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sec61a2Q9JLR1 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sec61a2Q9JLR1 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Sec61a2Q9JLR1 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.85□□□□□ -0.35
Sec61a2Q9JLR1 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Sec61a2Q9JLR1 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.85□□□□□ -0.35
Sec61a2Q9JLR1 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sec61a2Q9JLR1 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Sec61a2Q9JLR1 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sec61a2Q9JLR1 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sec61a2Q9JLR1 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sec61a2Q9JLR1 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sec61a2Q9JLR1 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.85□□□□□ -0.35
Sec61a2Q9JLR1 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sec61a2Q9JLR1 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.85□□□□□ -0.35
Sec61a2Q9JLR1 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.85□□□□□ -0.35
Sec61a2Q9JLR1 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sec61a2Q9JLR1 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sec61a2Q9JLR1 Gm9182-201ENSMUST00000217829 639 ntBASIC12.85□□□□□ -0.35
Sec61a2Q9JLR1 Chchd1-203ENSMUST00000224633 557 ntBASIC12.85□□□□□ -0.35
Sec61a2Q9JLR1 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sec61a2Q9JLR1 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.85□□□□□ -0.35
Sec61a2Q9JLR1 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.85□□□□□ -0.35
Sec61a2Q9JLR1 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sec61a2Q9JLR1 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.85□□□□□ -0.35
Sec61a2Q9JLR1 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Sec61a2Q9JLR1 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sec61a2Q9JLR1 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Sec61a2Q9JLR1 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sec61a2Q9JLR1 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sec61a2Q9JLR1 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sec61a2Q9JLR1 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.85□□□□□ -0.35
Sec61a2Q9JLR1 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sec61a2Q9JLR1 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sec61a2Q9JLR1 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sec61a2Q9JLR1 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sec61a2Q9JLR1 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sec61a2Q9JLR1 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.85□□□□□ -0.35
Sec61a2Q9JLR1 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sec61a2Q9JLR1 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sec61a2Q9JLR1 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sec61a2Q9JLR1 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sec61a2Q9JLR1 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sec61a2Q9JLR1 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sec61a2Q9JLR1 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sec61a2Q9JLR1 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.84□□□□□ -0.35
Sec61a2Q9JLR1 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Sec61a2Q9JLR1 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Sec61a2Q9JLR1 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.84□□□□□ -0.35
Sec61a2Q9JLR1 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.84□□□□□ -0.35
Sec61a2Q9JLR1 Gm15483-201ENSMUST00000120338 456 ntBASIC12.84□□□□□ -0.35
Sec61a2Q9JLR1 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.84□□□□□ -0.35
Sec61a2Q9JLR1 Gm27494-201ENSMUST00000184735 189 ntBASIC12.84□□□□□ -0.35
Sec61a2Q9JLR1 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Sec61a2Q9JLR1 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sec61a2Q9JLR1 Olfr286-202ENSMUST00000205305 969 ntBASIC12.84□□□□□ -0.35
Sec61a2Q9JLR1 Gm45098-201ENSMUST00000207179 657 ntBASIC12.84□□□□□ -0.35
Sec61a2Q9JLR1 Gm45612-201ENSMUST00000211320 160 ntBASIC12.84□□□□□ -0.35
Sec61a2Q9JLR1 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sec61a2Q9JLR1 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sec61a2Q9JLR1 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sec61a2Q9JLR1 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sec61a2Q9JLR1 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sec61a2Q9JLR1 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Sec61a2Q9JLR1 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Sec61a2Q9JLR1 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sec61a2Q9JLR1 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms