Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssmem1Q9D9Y8 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssmem1Q9D9Y8 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssmem1Q9D9Y8 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssmem1Q9D9Y8 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssmem1Q9D9Y8 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ssmem1Q9D9Y8 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssmem1Q9D9Y8 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ssmem1Q9D9Y8 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssmem1Q9D9Y8 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssmem1Q9D9Y8 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ssmem1Q9D9Y8 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ssmem1Q9D9Y8 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.31□□□□□ -0.44
Ssmem1Q9D9Y8 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ssmem1Q9D9Y8 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.31□□□□□ -0.44
Ssmem1Q9D9Y8 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ssmem1Q9D9Y8 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.31□□□□□ -0.44
Ssmem1Q9D9Y8 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.31□□□□□ -0.44
Ssmem1Q9D9Y8 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.31□□□□□ -0.44
Ssmem1Q9D9Y8 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssmem1Q9D9Y8 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ssmem1Q9D9Y8 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssmem1Q9D9Y8 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssmem1Q9D9Y8 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssmem1Q9D9Y8 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssmem1Q9D9Y8 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.31□□□□□ -0.44
Ssmem1Q9D9Y8 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ssmem1Q9D9Y8 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssmem1Q9D9Y8 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssmem1Q9D9Y8 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssmem1Q9D9Y8 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ssmem1Q9D9Y8 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssmem1Q9D9Y8 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ssmem1Q9D9Y8 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssmem1Q9D9Y8 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ssmem1Q9D9Y8 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.31□□□□□ -0.44
Ssmem1Q9D9Y8 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssmem1Q9D9Y8 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssmem1Q9D9Y8 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssmem1Q9D9Y8 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssmem1Q9D9Y8 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssmem1Q9D9Y8 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Ssmem1Q9D9Y8 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssmem1Q9D9Y8 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssmem1Q9D9Y8 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssmem1Q9D9Y8 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssmem1Q9D9Y8 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ssmem1Q9D9Y8 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ssmem1Q9D9Y8 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssmem1Q9D9Y8 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssmem1Q9D9Y8 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssmem1Q9D9Y8 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssmem1Q9D9Y8 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.3□□□□□ -0.44
Ssmem1Q9D9Y8 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssmem1Q9D9Y8 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssmem1Q9D9Y8 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssmem1Q9D9Y8 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssmem1Q9D9Y8 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Ssmem1Q9D9Y8 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssmem1Q9D9Y8 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssmem1Q9D9Y8 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssmem1Q9D9Y8 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ssmem1Q9D9Y8 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ssmem1Q9D9Y8 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ssmem1Q9D9Y8 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssmem1Q9D9Y8 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.3□□□□□ -0.44
Ssmem1Q9D9Y8 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.3□□□□□ -0.44
Ssmem1Q9D9Y8 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.3□□□□□ -0.44
Ssmem1Q9D9Y8 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ssmem1Q9D9Y8 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Ssmem1Q9D9Y8 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssmem1Q9D9Y8 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.3□□□□□ -0.44
Ssmem1Q9D9Y8 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.3□□□□□ -0.44
Ssmem1Q9D9Y8 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ssmem1Q9D9Y8 Gm46209-201ENSMUST00000217912 553 ntBASIC12.3□□□□□ -0.44
Ssmem1Q9D9Y8 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.3□□□□□ -0.44
Ssmem1Q9D9Y8 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssmem1Q9D9Y8 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssmem1Q9D9Y8 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ssmem1Q9D9Y8 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Ssmem1Q9D9Y8 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssmem1Q9D9Y8 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssmem1Q9D9Y8 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssmem1Q9D9Y8 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ssmem1Q9D9Y8 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssmem1Q9D9Y8 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssmem1Q9D9Y8 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.3□□□□□ -0.44
Ssmem1Q9D9Y8 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssmem1Q9D9Y8 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssmem1Q9D9Y8 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ssmem1Q9D9Y8 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms