Protein–RNA interactions for Protein: Q9D968

Hcfc2, Host cell factor 2, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc2Q9D968 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hcfc2Q9D968 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hcfc2Q9D968 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hcfc2Q9D968 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hcfc2Q9D968 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hcfc2Q9D968 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hcfc2Q9D968 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hcfc2Q9D968 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC10.84□□□□□ -0.67
Hcfc2Q9D968 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hcfc2Q9D968 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hcfc2Q9D968 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Hcfc2Q9D968 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hcfc2Q9D968 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC10.84□□□□□ -0.67
Hcfc2Q9D968 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hcfc2Q9D968 Gm33142-201ENSMUST00000193913 867 ntBASIC10.84□□□□□ -0.67
Hcfc2Q9D968 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC10.84□□□□□ -0.67
Hcfc2Q9D968 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hcfc2Q9D968 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hcfc2Q9D968 Ankra2-208ENSMUST00000226100 1476 ntBASIC10.84□□□□□ -0.67
Hcfc2Q9D968 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hcfc2Q9D968 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Hcfc2Q9D968 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hcfc2Q9D968 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hcfc2Q9D968 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC10.84□□□□□ -0.67
Hcfc2Q9D968 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Hcfc2Q9D968 Gm37644-201ENSMUST00000192190 2270 ntBASIC10.84□□□□□ -0.67
Hcfc2Q9D968 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hcfc2Q9D968 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hcfc2Q9D968 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hcfc2Q9D968 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hcfc2Q9D968 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hcfc2Q9D968 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hcfc2Q9D968 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hcfc2Q9D968 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hcfc2Q9D968 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hcfc2Q9D968 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hcfc2Q9D968 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hcfc2Q9D968 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hcfc2Q9D968 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hcfc2Q9D968 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hcfc2Q9D968 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hcfc2Q9D968 Gm14451-201ENSMUST00000121581 1542 ntBASIC10.84□□□□□ -0.67
Hcfc2Q9D968 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hcfc2Q9D968 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hcfc2Q9D968 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hcfc2Q9D968 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Hcfc2Q9D968 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hcfc2Q9D968 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Hcfc2Q9D968 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hcfc2Q9D968 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Hcfc2Q9D968 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Hcfc2Q9D968 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hcfc2Q9D968 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hcfc2Q9D968 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Hcfc2Q9D968 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hcfc2Q9D968 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hcfc2Q9D968 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Hcfc2Q9D968 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Hcfc2Q9D968 Gm11405-201ENSMUST00000118689 1556 ntBASIC10.83□□□□□ -0.68
Hcfc2Q9D968 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hcfc2Q9D968 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hcfc2Q9D968 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hcfc2Q9D968 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Hcfc2Q9D968 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hcfc2Q9D968 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC10.83□□□□□ -0.68
Hcfc2Q9D968 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC10.83□□□□□ -0.68
Hcfc2Q9D968 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hcfc2Q9D968 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC10.83□□□□□ -0.68
Hcfc2Q9D968 AC160338.1-201ENSMUST00000214232 705 ntBASIC10.83□□□□□ -0.68
Hcfc2Q9D968 AC154471.1-201ENSMUST00000224418 436 ntBASIC10.83□□□□□ -0.68
Hcfc2Q9D968 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hcfc2Q9D968 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hcfc2Q9D968 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hcfc2Q9D968 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Hcfc2Q9D968 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Hcfc2Q9D968 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hcfc2Q9D968 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Hcfc2Q9D968 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Hcfc2Q9D968 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Hcfc2Q9D968 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hcfc2Q9D968 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hcfc2Q9D968 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hcfc2Q9D968 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hcfc2Q9D968 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hcfc2Q9D968 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hcfc2Q9D968 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hcfc2Q9D968 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Hcfc2Q9D968 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Hcfc2Q9D968 Gm12626-201ENSMUST00000117339 1983 ntBASIC10.83□□□□□ -0.68
Hcfc2Q9D968 Gm12623-201ENSMUST00000119849 1983 ntBASIC10.83□□□□□ -0.68
Hcfc2Q9D968 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hcfc2Q9D968 Gm3928-201ENSMUST00000121141 1307 ntBASIC10.83□□□□□ -0.68
Hcfc2Q9D968 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hcfc2Q9D968 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC10.82□□□□□ -0.68
Hcfc2Q9D968 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hcfc2Q9D968 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hcfc2Q9D968 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC10.82□□□□□ -0.68
Hcfc2Q9D968 Gm18244-201ENSMUST00000219747 1566 ntBASIC10.82□□□□□ -0.68
Hcfc2Q9D968 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hcfc2Q9D968 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms