Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
U2af1Q9D883 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
U2af1Q9D883 Gm12620-201ENSMUST00000119791 1986 ntBASIC18.72■□□□□ 0.59
U2af1Q9D883 Gm12612-201ENSMUST00000140182 1986 ntBASIC18.72■□□□□ 0.59
U2af1Q9D883 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
U2af1Q9D883 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
U2af1Q9D883 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
U2af1Q9D883 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
U2af1Q9D883 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
U2af1Q9D883 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
U2af1Q9D883 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
U2af1Q9D883 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
U2af1Q9D883 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
U2af1Q9D883 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
U2af1Q9D883 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
U2af1Q9D883 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC18.72■□□□□ 0.59
U2af1Q9D883 Gm7820-201ENSMUST00000121012 1052 ntBASIC18.72■□□□□ 0.59
U2af1Q9D883 Gm12134-201ENSMUST00000122109 520 ntBASIC18.72■□□□□ 0.59
U2af1Q9D883 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
U2af1Q9D883 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC18.72■□□□□ 0.59
U2af1Q9D883 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
U2af1Q9D883 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
U2af1Q9D883 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
U2af1Q9D883 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
U2af1Q9D883 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
U2af1Q9D883 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
U2af1Q9D883 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
U2af1Q9D883 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
U2af1Q9D883 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
U2af1Q9D883 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
U2af1Q9D883 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
U2af1Q9D883 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
U2af1Q9D883 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
U2af1Q9D883 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
U2af1Q9D883 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
U2af1Q9D883 Gm6263-201ENSMUST00000120029 1342 ntBASIC18.72■□□□□ 0.59
U2af1Q9D883 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
U2af1Q9D883 Syt7-204ENSMUST00000223586 1344 ntBASIC18.72■□□□□ 0.59
U2af1Q9D883 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
U2af1Q9D883 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
U2af1Q9D883 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
U2af1Q9D883 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
U2af1Q9D883 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
U2af1Q9D883 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
U2af1Q9D883 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
U2af1Q9D883 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC18.71■□□□□ 0.59
U2af1Q9D883 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
U2af1Q9D883 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
U2af1Q9D883 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
U2af1Q9D883 Gm15460-201ENSMUST00000118147 391 ntBASIC18.71■□□□□ 0.59
U2af1Q9D883 Gm27437-201ENSMUST00000183429 107 ntBASIC18.71■□□□□ 0.59
U2af1Q9D883 Gm29667-201ENSMUST00000190817 490 ntBASIC18.71■□□□□ 0.59
U2af1Q9D883 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
U2af1Q9D883 Gm7390-201ENSMUST00000212452 1216 ntBASIC18.71■□□□□ 0.59
U2af1Q9D883 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC18.71■□□□□ 0.59
U2af1Q9D883 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
U2af1Q9D883 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
U2af1Q9D883 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
U2af1Q9D883 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC18.71■□□□□ 0.59
U2af1Q9D883 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
U2af1Q9D883 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
U2af1Q9D883 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
U2af1Q9D883 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
U2af1Q9D883 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
U2af1Q9D883 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
U2af1Q9D883 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
U2af1Q9D883 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
U2af1Q9D883 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
U2af1Q9D883 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
U2af1Q9D883 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC18.7■□□□□ 0.58
U2af1Q9D883 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
U2af1Q9D883 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
U2af1Q9D883 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
U2af1Q9D883 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
U2af1Q9D883 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
U2af1Q9D883 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
U2af1Q9D883 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
U2af1Q9D883 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
U2af1Q9D883 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
U2af1Q9D883 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
U2af1Q9D883 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
U2af1Q9D883 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
U2af1Q9D883 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
U2af1Q9D883 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC18.7■□□□□ 0.58
U2af1Q9D883 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
U2af1Q9D883 Gm6159-201ENSMUST00000191249 1724 ntBASIC18.7■□□□□ 0.58
U2af1Q9D883 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
U2af1Q9D883 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC18.7■□□□□ 0.58
U2af1Q9D883 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC18.7■□□□□ 0.58
U2af1Q9D883 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC18.7■□□□□ 0.58
U2af1Q9D883 CT025535.1-201ENSMUST00000227172 491 ntBASIC18.7■□□□□ 0.58
U2af1Q9D883 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
U2af1Q9D883 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
U2af1Q9D883 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
U2af1Q9D883 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
U2af1Q9D883 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
U2af1Q9D883 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
U2af1Q9D883 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
U2af1Q9D883 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
U2af1Q9D883 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms