Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nip7Q9CXK8 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nip7Q9CXK8 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nip7Q9CXK8 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nip7Q9CXK8 AL645783.1-201ENSMUST00000221416 1832 ntBASIC17.65■□□□□ 0.42
Nip7Q9CXK8 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Nip7Q9CXK8 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Nip7Q9CXK8 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nip7Q9CXK8 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nip7Q9CXK8 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nip7Q9CXK8 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nip7Q9CXK8 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Nip7Q9CXK8 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.65■□□□□ 0.42
Nip7Q9CXK8 Gm11524-201ENSMUST00000119349 807 ntBASIC17.65■□□□□ 0.42
Nip7Q9CXK8 Gm13385-201ENSMUST00000121089 220 ntBASIC17.65■□□□□ 0.42
Nip7Q9CXK8 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nip7Q9CXK8 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nip7Q9CXK8 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nip7Q9CXK8 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nip7Q9CXK8 AC110817.1-201ENSMUST00000225706 605 ntBASIC17.65■□□□□ 0.42
Nip7Q9CXK8 AC192088.1-201ENSMUST00000227561 301 ntBASIC17.65■□□□□ 0.42
Nip7Q9CXK8 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nip7Q9CXK8 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nip7Q9CXK8 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nip7Q9CXK8 Gm14451-201ENSMUST00000121581 1542 ntBASIC17.65■□□□□ 0.42
Nip7Q9CXK8 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nip7Q9CXK8 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nip7Q9CXK8 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nip7Q9CXK8 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC17.65■□□□□ 0.42
Nip7Q9CXK8 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nip7Q9CXK8 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nip7Q9CXK8 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nip7Q9CXK8 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nip7Q9CXK8 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nip7Q9CXK8 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Nip7Q9CXK8 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Nip7Q9CXK8 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.64■□□□□ 0.42
Nip7Q9CXK8 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Nip7Q9CXK8 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Nip7Q9CXK8 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Nip7Q9CXK8 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nip7Q9CXK8 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nip7Q9CXK8 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nip7Q9CXK8 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nip7Q9CXK8 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Nip7Q9CXK8 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nip7Q9CXK8 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nip7Q9CXK8 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nip7Q9CXK8 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nip7Q9CXK8 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nip7Q9CXK8 Gm12742-201ENSMUST00000117326 410 ntBASIC17.64■□□□□ 0.41
Nip7Q9CXK8 Gm15429-201ENSMUST00000151268 798 ntBASIC17.64■□□□□ 0.41
Nip7Q9CXK8 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nip7Q9CXK8 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC17.64■□□□□ 0.41
Nip7Q9CXK8 Gm27486-201ENSMUST00000184923 80 ntBASIC17.64■□□□□ 0.41
Nip7Q9CXK8 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nip7Q9CXK8 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Nip7Q9CXK8 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC17.64■□□□□ 0.41
Nip7Q9CXK8 AC155729.1-201ENSMUST00000227758 544 ntBASIC17.64■□□□□ 0.41
Nip7Q9CXK8 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC17.64■□□□□ 0.41
Nip7Q9CXK8 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nip7Q9CXK8 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Nip7Q9CXK8 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nip7Q9CXK8 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nip7Q9CXK8 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nip7Q9CXK8 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nip7Q9CXK8 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nip7Q9CXK8 AC114543.1-201ENSMUST00000226451 1558 ntBASIC17.63■□□□□ 0.41
Nip7Q9CXK8 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nip7Q9CXK8 Gm12957-201ENSMUST00000117835 377 ntBASIC17.63■□□□□ 0.41
Nip7Q9CXK8 Gm11557-201ENSMUST00000120200 1008 ntBASIC17.63■□□□□ 0.41
Nip7Q9CXK8 Gm15376-201ENSMUST00000122258 783 ntBASIC17.63■□□□□ 0.41
Nip7Q9CXK8 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC17.63■□□□□ 0.41
Nip7Q9CXK8 Gm8927-201ENSMUST00000181978 981 ntBASIC17.63■□□□□ 0.41
Nip7Q9CXK8 AC125117.1-201ENSMUST00000228121 468 ntBASIC17.63■□□□□ 0.41
Nip7Q9CXK8 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nip7Q9CXK8 Gm3222-201ENSMUST00000071282 990 ntBASIC17.63■□□□□ 0.41
Nip7Q9CXK8 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nip7Q9CXK8 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.63■□□□□ 0.41
Nip7Q9CXK8 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nip7Q9CXK8 Gm9109-201ENSMUST00000120254 1405 ntBASIC17.63■□□□□ 0.41
Nip7Q9CXK8 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nip7Q9CXK8 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Nip7Q9CXK8 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nip7Q9CXK8 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nip7Q9CXK8 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nip7Q9CXK8 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC17.62■□□□□ 0.41
Nip7Q9CXK8 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nip7Q9CXK8 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nip7Q9CXK8 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nip7Q9CXK8 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nip7Q9CXK8 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nip7Q9CXK8 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nip7Q9CXK8 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
Nip7Q9CXK8 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nip7Q9CXK8 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC17.62■□□□□ 0.41
Nip7Q9CXK8 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC17.62■□□□□ 0.41
Nip7Q9CXK8 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC17.62■□□□□ 0.41
Nip7Q9CXK8 Mir6420-201ENSMUST00000185032 102 ntBASIC17.62■□□□□ 0.41
Nip7Q9CXK8 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms