Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Smc1aQ9CU62 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smc1aQ9CU62 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smc1aQ9CU62 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.97■□□□□ 0.15
Smc1aQ9CU62 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smc1aQ9CU62 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Smc1aQ9CU62 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.97■□□□□ 0.15
Smc1aQ9CU62 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Smc1aQ9CU62 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Smc1aQ9CU62 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.97■□□□□ 0.15
Smc1aQ9CU62 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smc1aQ9CU62 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.97■□□□□ 0.15
Smc1aQ9CU62 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smc1aQ9CU62 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smc1aQ9CU62 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Smc1aQ9CU62 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Smc1aQ9CU62 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smc1aQ9CU62 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smc1aQ9CU62 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Smc1aQ9CU62 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Smc1aQ9CU62 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Smc1aQ9CU62 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Smc1aQ9CU62 Ntrk2-208ENSMUST00000225583 2719 ntBASIC15.96■□□□□ 0.15
Smc1aQ9CU62 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Smc1aQ9CU62 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Smc1aQ9CU62 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Smc1aQ9CU62 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Smc1aQ9CU62 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Smc1aQ9CU62 Gm45003-201ENSMUST00000205875 2158 ntBASIC15.96■□□□□ 0.15
Smc1aQ9CU62 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Smc1aQ9CU62 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
Smc1aQ9CU62 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.96■□□□□ 0.15
Smc1aQ9CU62 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Smc1aQ9CU62 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Smc1aQ9CU62 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Smc1aQ9CU62 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC15.96■□□□□ 0.15
Smc1aQ9CU62 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Smc1aQ9CU62 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.96■□□□□ 0.15
Smc1aQ9CU62 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.96■□□□□ 0.15
Smc1aQ9CU62 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
Smc1aQ9CU62 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Smc1aQ9CU62 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Smc1aQ9CU62 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Smc1aQ9CU62 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Smc1aQ9CU62 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Smc1aQ9CU62 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Smc1aQ9CU62 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Smc1aQ9CU62 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smc1aQ9CU62 AC159621.2-201ENSMUST00000223519 1326 ntBASIC15.95■□□□□ 0.14
Smc1aQ9CU62 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smc1aQ9CU62 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smc1aQ9CU62 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Smc1aQ9CU62 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC15.95■□□□□ 0.14
Smc1aQ9CU62 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smc1aQ9CU62 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smc1aQ9CU62 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
Smc1aQ9CU62 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smc1aQ9CU62 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smc1aQ9CU62 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smc1aQ9CU62 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smc1aQ9CU62 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.95■□□□□ 0.14
Smc1aQ9CU62 Gm7336-201ENSMUST00000107041 1232 ntBASIC15.95■□□□□ 0.14
Smc1aQ9CU62 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Smc1aQ9CU62 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Smc1aQ9CU62 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC15.95■□□□□ 0.14
Smc1aQ9CU62 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smc1aQ9CU62 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smc1aQ9CU62 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smc1aQ9CU62 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Smc1aQ9CU62 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Smc1aQ9CU62 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smc1aQ9CU62 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Smc1aQ9CU62 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smc1aQ9CU62 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Smc1aQ9CU62 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smc1aQ9CU62 Gm26513-201ENSMUST00000181802 2489 ntBASIC15.94■□□□□ 0.14
Smc1aQ9CU62 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Smc1aQ9CU62 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smc1aQ9CU62 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Smc1aQ9CU62 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smc1aQ9CU62 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
Smc1aQ9CU62 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Smc1aQ9CU62 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smc1aQ9CU62 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smc1aQ9CU62 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smc1aQ9CU62 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smc1aQ9CU62 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smc1aQ9CU62 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Smc1aQ9CU62 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC15.94■□□□□ 0.14
Smc1aQ9CU62 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.94■□□□□ 0.14
Smc1aQ9CU62 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC15.94■□□□□ 0.14
Smc1aQ9CU62 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC15.94■□□□□ 0.14
Smc1aQ9CU62 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smc1aQ9CU62 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Smc1aQ9CU62 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smc1aQ9CU62 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smc1aQ9CU62 Carlr-201ENSMUST00000181515 2574 ntBASIC15.94■□□□□ 0.14
Smc1aQ9CU62 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smc1aQ9CU62 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smc1aQ9CU62 AC121805.2-201ENSMUST00000218808 2538 ntBASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms