Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim11Q99PQ2 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trim11Q99PQ2 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim11Q99PQ2 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim11Q99PQ2 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim11Q99PQ2 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC16.24■□□□□ 0.19
Trim11Q99PQ2 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim11Q99PQ2 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim11Q99PQ2 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim11Q99PQ2 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trim11Q99PQ2 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trim11Q99PQ2 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim11Q99PQ2 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim11Q99PQ2 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim11Q99PQ2 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trim11Q99PQ2 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim11Q99PQ2 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim11Q99PQ2 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim11Q99PQ2 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim11Q99PQ2 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
Trim11Q99PQ2 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim11Q99PQ2 Gm11745-201ENSMUST00000121669 448 ntBASIC16.23■□□□□ 0.19
Trim11Q99PQ2 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim11Q99PQ2 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim11Q99PQ2 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim11Q99PQ2 Gm38225-201ENSMUST00000194001 393 ntBASIC16.23■□□□□ 0.19
Trim11Q99PQ2 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC16.23■□□□□ 0.19
Trim11Q99PQ2 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trim11Q99PQ2 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim11Q99PQ2 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim11Q99PQ2 Gm15500-202ENSMUST00000071641 1019 ntBASIC16.23■□□□□ 0.19
Trim11Q99PQ2 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Trim11Q99PQ2 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim11Q99PQ2 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim11Q99PQ2 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim11Q99PQ2 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim11Q99PQ2 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim11Q99PQ2 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim11Q99PQ2 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trim11Q99PQ2 Gm26513-201ENSMUST00000181802 2489 ntBASIC16.23■□□□□ 0.19
Trim11Q99PQ2 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim11Q99PQ2 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim11Q99PQ2 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim11Q99PQ2 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim11Q99PQ2 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim11Q99PQ2 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim11Q99PQ2 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim11Q99PQ2 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim11Q99PQ2 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trim11Q99PQ2 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim11Q99PQ2 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim11Q99PQ2 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim11Q99PQ2 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim11Q99PQ2 Gm12882-201ENSMUST00000121696 517 ntBASIC16.22■□□□□ 0.19
Trim11Q99PQ2 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.22■□□□□ 0.19
Trim11Q99PQ2 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC16.22■□□□□ 0.19
Trim11Q99PQ2 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC16.22■□□□□ 0.19
Trim11Q99PQ2 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.22■□□□□ 0.19
Trim11Q99PQ2 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC16.22■□□□□ 0.19
Trim11Q99PQ2 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.22■□□□□ 0.19
Trim11Q99PQ2 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim11Q99PQ2 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim11Q99PQ2 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim11Q99PQ2 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Trim11Q99PQ2 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim11Q99PQ2 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trim11Q99PQ2 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim11Q99PQ2 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.22■□□□□ 0.19
Trim11Q99PQ2 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim11Q99PQ2 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim11Q99PQ2 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim11Q99PQ2 Nudt18-203ENSMUST00000228768 1578 ntBASIC16.21■□□□□ 0.19
Trim11Q99PQ2 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC16.21■□□□□ 0.19
Trim11Q99PQ2 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim11Q99PQ2 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim11Q99PQ2 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim11Q99PQ2 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Trim11Q99PQ2 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC16.21■□□□□ 0.19
Trim11Q99PQ2 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Trim11Q99PQ2 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim11Q99PQ2 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim11Q99PQ2 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Trim11Q99PQ2 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC16.21■□□□□ 0.19
Trim11Q99PQ2 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trim11Q99PQ2 Gm25911-201ENSMUST00000157621 56 ntBASIC16.21■□□□□ 0.19
Trim11Q99PQ2 Gm27494-201ENSMUST00000184735 189 ntBASIC16.21■□□□□ 0.19
Trim11Q99PQ2 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC16.21■□□□□ 0.19
Trim11Q99PQ2 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC16.21■□□□□ 0.19
Trim11Q99PQ2 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trim11Q99PQ2 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim11Q99PQ2 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim11Q99PQ2 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim11Q99PQ2 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim11Q99PQ2 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim11Q99PQ2 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim11Q99PQ2 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC16.21■□□□□ 0.18
Trim11Q99PQ2 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trim11Q99PQ2 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trim11Q99PQ2 Gm42466-201ENSMUST00000202099 1301 ntBASIC16.2■□□□□ 0.18
Trim11Q99PQ2 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms