Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.77■□□□□ 0.12
Pcdh15Q99PJ1 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdh15Q99PJ1 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdh15Q99PJ1 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Pcdh15Q99PJ1 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdh15Q99PJ1 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdh15Q99PJ1 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdh15Q99PJ1 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
Pcdh15Q99PJ1 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdh15Q99PJ1 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdh15Q99PJ1 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh15Q99PJ1 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh15Q99PJ1 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC15.76■□□□□ 0.11
Pcdh15Q99PJ1 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh15Q99PJ1 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh15Q99PJ1 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh15Q99PJ1 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Pcdh15Q99PJ1 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC15.76■□□□□ 0.11
Pcdh15Q99PJ1 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh15Q99PJ1 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh15Q99PJ1 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh15Q99PJ1 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh15Q99PJ1 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh15Q99PJ1 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Pcdh15Q99PJ1 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh15Q99PJ1 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh15Q99PJ1 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh15Q99PJ1 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Pcdh15Q99PJ1 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh15Q99PJ1 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh15Q99PJ1 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC15.76■□□□□ 0.11
Pcdh15Q99PJ1 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh15Q99PJ1 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC15.76■□□□□ 0.11
Pcdh15Q99PJ1 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC15.76■□□□□ 0.11
Pcdh15Q99PJ1 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh15Q99PJ1 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Pcdh15Q99PJ1 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Pcdh15Q99PJ1 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh15Q99PJ1 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh15Q99PJ1 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh15Q99PJ1 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh15Q99PJ1 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh15Q99PJ1 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh15Q99PJ1 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh15Q99PJ1 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh15Q99PJ1 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh15Q99PJ1 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh15Q99PJ1 Gm24990-201ENSMUST00000157406 323 ntBASIC15.75■□□□□ 0.11
Pcdh15Q99PJ1 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC15.75■□□□□ 0.11
Pcdh15Q99PJ1 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Pcdh15Q99PJ1 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh15Q99PJ1 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh15Q99PJ1 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh15Q99PJ1 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh15Q99PJ1 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh15Q99PJ1 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh15Q99PJ1 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Pcdh15Q99PJ1 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh15Q99PJ1 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.75■□□□□ 0.11
Pcdh15Q99PJ1 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.75■□□□□ 0.11
Pcdh15Q99PJ1 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh15Q99PJ1 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh15Q99PJ1 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh15Q99PJ1 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh15Q99PJ1 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh15Q99PJ1 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh15Q99PJ1 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh15Q99PJ1 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh15Q99PJ1 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
Pcdh15Q99PJ1 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC15.74■□□□□ 0.11
Pcdh15Q99PJ1 Mir5120-201ENSMUST00000175020 78 ntBASIC15.74■□□□□ 0.11
Pcdh15Q99PJ1 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC15.74■□□□□ 0.11
Pcdh15Q99PJ1 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
Pcdh15Q99PJ1 AC131997.1-201ENSMUST00000228611 1229 ntBASIC15.74■□□□□ 0.11
Pcdh15Q99PJ1 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh15Q99PJ1 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh15Q99PJ1 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh15Q99PJ1 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.74■□□□□ 0.11
Pcdh15Q99PJ1 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh15Q99PJ1 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Pcdh15Q99PJ1 Gm20632-201ENSMUST00000176760 2427 ntBASIC15.74■□□□□ 0.11
Pcdh15Q99PJ1 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh15Q99PJ1 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Pcdh15Q99PJ1 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh15Q99PJ1 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Pcdh15Q99PJ1 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC15.74■□□□□ 0.11
Pcdh15Q99PJ1 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
Pcdh15Q99PJ1 Gm22334-201ENSMUST00000158070 133 ntBASIC15.74■□□□□ 0.11
Pcdh15Q99PJ1 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC15.74■□□□□ 0.11
Pcdh15Q99PJ1 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC15.74■□□□□ 0.11
Pcdh15Q99PJ1 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC15.74■□□□□ 0.11
Pcdh15Q99PJ1 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh15Q99PJ1 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC15.74■□□□□ 0.11
Pcdh15Q99PJ1 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh15Q99PJ1 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh15Q99PJ1 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh15Q99PJ1 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh15Q99PJ1 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh15Q99PJ1 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh15Q99PJ1 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms