Protein–RNA interactions for Protein: Q99PE5

Smim3, Small integral membrane protein 3, mousemouse

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim3Q99PE5 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Smim3Q99PE5 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Smim3Q99PE5 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Smim3Q99PE5 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Smim3Q99PE5 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smim3Q99PE5 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.14□□□□□ -0.47
Smim3Q99PE5 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.14□□□□□ -0.47
Smim3Q99PE5 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Smim3Q99PE5 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.14□□□□□ -0.47
Smim3Q99PE5 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smim3Q99PE5 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smim3Q99PE5 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smim3Q99PE5 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smim3Q99PE5 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Smim3Q99PE5 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smim3Q99PE5 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Smim3Q99PE5 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.14□□□□□ -0.47
Smim3Q99PE5 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC12.14□□□□□ -0.47
Smim3Q99PE5 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.14□□□□□ -0.47
Smim3Q99PE5 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Smim3Q99PE5 Gm9726-201ENSMUST00000180321 678 ntBASIC12.14□□□□□ -0.47
Smim3Q99PE5 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Smim3Q99PE5 Gm17808-201ENSMUST00000200859 894 ntBASIC12.14□□□□□ -0.47
Smim3Q99PE5 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Smim3Q99PE5 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Smim3Q99PE5 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smim3Q99PE5 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smim3Q99PE5 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smim3Q99PE5 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smim3Q99PE5 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.14□□□□□ -0.47
Smim3Q99PE5 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smim3Q99PE5 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Smim3Q99PE5 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Smim3Q99PE5 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.14□□□□□ -0.47
Smim3Q99PE5 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smim3Q99PE5 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smim3Q99PE5 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.14□□□□□ -0.47
Smim3Q99PE5 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smim3Q99PE5 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim3Q99PE5 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim3Q99PE5 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim3Q99PE5 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Smim3Q99PE5 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Smim3Q99PE5 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Smim3Q99PE5 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim3Q99PE5 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Smim3Q99PE5 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim3Q99PE5 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim3Q99PE5 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim3Q99PE5 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim3Q99PE5 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim3Q99PE5 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim3Q99PE5 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Smim3Q99PE5 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Smim3Q99PE5 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Smim3Q99PE5 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim3Q99PE5 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim3Q99PE5 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC12.13□□□□□ -0.47
Smim3Q99PE5 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.13□□□□□ -0.47
Smim3Q99PE5 AC153881.2-201ENSMUST00000214877 204 ntBASIC12.13□□□□□ -0.47
Smim3Q99PE5 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim3Q99PE5 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim3Q99PE5 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Smim3Q99PE5 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim3Q99PE5 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Smim3Q99PE5 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Smim3Q99PE5 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Smim3Q99PE5 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim3Q99PE5 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim3Q99PE5 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim3Q99PE5 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim3Q99PE5 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim3Q99PE5 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Smim3Q99PE5 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim3Q99PE5 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smim3Q99PE5 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.13□□□□□ -0.47
Smim3Q99PE5 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Smim3Q99PE5 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Smim3Q99PE5 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.12□□□□□ -0.47
Smim3Q99PE5 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.12□□□□□ -0.47
Smim3Q99PE5 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim3Q99PE5 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim3Q99PE5 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim3Q99PE5 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim3Q99PE5 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim3Q99PE5 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Smim3Q99PE5 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim3Q99PE5 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.12□□□□□ -0.47
Smim3Q99PE5 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim3Q99PE5 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Smim3Q99PE5 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim3Q99PE5 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.12□□□□□ -0.47
Smim3Q99PE5 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim3Q99PE5 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.12□□□□□ -0.47
Smim3Q99PE5 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC12.12□□□□□ -0.47
Smim3Q99PE5 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC12.12□□□□□ -0.47
Smim3Q99PE5 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.12□□□□□ -0.47
Smim3Q99PE5 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim3Q99PE5 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim3Q99PE5 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms