Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf3Q99LI7 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf3Q99LI7 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf3Q99LI7 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf3Q99LI7 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf3Q99LI7 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Cstf3Q99LI7 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.79□□□□□ -0.2
Cstf3Q99LI7 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf3Q99LI7 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf3Q99LI7 Gm18737-201ENSMUST00000173594 937 ntBASIC13.79□□□□□ -0.2
Cstf3Q99LI7 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf3Q99LI7 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.79□□□□□ -0.2
Cstf3Q99LI7 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.79□□□□□ -0.2
Cstf3Q99LI7 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf3Q99LI7 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf3Q99LI7 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.79□□□□□ -0.2
Cstf3Q99LI7 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf3Q99LI7 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf3Q99LI7 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf3Q99LI7 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf3Q99LI7 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Cstf3Q99LI7 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf3Q99LI7 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf3Q99LI7 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf3Q99LI7 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Cstf3Q99LI7 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf3Q99LI7 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf3Q99LI7 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf3Q99LI7 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Cstf3Q99LI7 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf3Q99LI7 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.78□□□□□ -0.2
Cstf3Q99LI7 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Cstf3Q99LI7 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf3Q99LI7 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.78□□□□□ -0.2
Cstf3Q99LI7 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf3Q99LI7 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf3Q99LI7 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf3Q99LI7 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf3Q99LI7 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.78□□□□□ -0.2
Cstf3Q99LI7 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf3Q99LI7 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf3Q99LI7 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.78□□□□□ -0.2
Cstf3Q99LI7 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf3Q99LI7 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf3Q99LI7 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Cstf3Q99LI7 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Cstf3Q99LI7 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.78□□□□□ -0.2
Cstf3Q99LI7 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.78□□□□□ -0.2
Cstf3Q99LI7 Gm11025-201ENSMUST00000140773 466 ntBASIC13.78□□□□□ -0.2
Cstf3Q99LI7 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cstf3Q99LI7 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf3Q99LI7 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf3Q99LI7 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf3Q99LI7 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.78□□□□□ -0.2
Cstf3Q99LI7 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf3Q99LI7 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf3Q99LI7 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf3Q99LI7 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf3Q99LI7 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Cstf3Q99LI7 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.78□□□□□ -0.2
Cstf3Q99LI7 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf3Q99LI7 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.78□□□□□ -0.2
Cstf3Q99LI7 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf3Q99LI7 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cstf3Q99LI7 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf3Q99LI7 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf3Q99LI7 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf3Q99LI7 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf3Q99LI7 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf3Q99LI7 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf3Q99LI7 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf3Q99LI7 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Cstf3Q99LI7 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf3Q99LI7 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf3Q99LI7 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf3Q99LI7 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cstf3Q99LI7 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Cstf3Q99LI7 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Cstf3Q99LI7 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.77□□□□□ -0.2
Cstf3Q99LI7 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Cstf3Q99LI7 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cstf3Q99LI7 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cstf3Q99LI7 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Cstf3Q99LI7 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.77□□□□□ -0.21
Cstf3Q99LI7 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cstf3Q99LI7 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cstf3Q99LI7 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cstf3Q99LI7 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cstf3Q99LI7 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.77□□□□□ -0.21
Cstf3Q99LI7 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cstf3Q99LI7 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.77□□□□□ -0.21
Cstf3Q99LI7 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.77□□□□□ -0.21
Cstf3Q99LI7 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cstf3Q99LI7 Gm20553-201ENSMUST00000204205 844 ntBASIC13.77□□□□□ -0.21
Cstf3Q99LI7 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cstf3Q99LI7 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cstf3Q99LI7 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.77□□□□□ -0.21
Cstf3Q99LI7 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.77□□□□□ -0.21
Cstf3Q99LI7 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cstf3Q99LI7 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms