Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lims1Q99JW4 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.98□□□□□ -0.33
Lims1Q99JW4 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Lims1Q99JW4 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Lims1Q99JW4 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Lims1Q99JW4 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lims1Q99JW4 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lims1Q99JW4 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lims1Q99JW4 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lims1Q99JW4 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lims1Q99JW4 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lims1Q99JW4 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lims1Q99JW4 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.97□□□□□ -0.33
Lims1Q99JW4 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lims1Q99JW4 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lims1Q99JW4 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Lims1Q99JW4 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lims1Q99JW4 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Lims1Q99JW4 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.97□□□□□ -0.33
Lims1Q99JW4 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lims1Q99JW4 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lims1Q99JW4 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lims1Q99JW4 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.97□□□□□ -0.33
Lims1Q99JW4 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.97□□□□□ -0.33
Lims1Q99JW4 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lims1Q99JW4 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.97□□□□□ -0.33
Lims1Q99JW4 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lims1Q99JW4 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lims1Q99JW4 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Lims1Q99JW4 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lims1Q99JW4 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lims1Q99JW4 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Lims1Q99JW4 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lims1Q99JW4 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lims1Q99JW4 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lims1Q99JW4 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lims1Q99JW4 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lims1Q99JW4 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lims1Q99JW4 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lims1Q99JW4 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Lims1Q99JW4 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lims1Q99JW4 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.97□□□□□ -0.33
Lims1Q99JW4 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lims1Q99JW4 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lims1Q99JW4 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lims1Q99JW4 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lims1Q99JW4 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lims1Q99JW4 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lims1Q99JW4 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lims1Q99JW4 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lims1Q99JW4 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.96□□□□□ -0.33
Lims1Q99JW4 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lims1Q99JW4 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lims1Q99JW4 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lims1Q99JW4 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.96□□□□□ -0.33
Lims1Q99JW4 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lims1Q99JW4 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.96□□□□□ -0.33
Lims1Q99JW4 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.96□□□□□ -0.33
Lims1Q99JW4 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lims1Q99JW4 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lims1Q99JW4 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lims1Q99JW4 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lims1Q99JW4 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lims1Q99JW4 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.96□□□□□ -0.33
Lims1Q99JW4 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC12.96□□□□□ -0.33
Lims1Q99JW4 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Lims1Q99JW4 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lims1Q99JW4 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lims1Q99JW4 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lims1Q99JW4 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.96□□□□□ -0.33
Lims1Q99JW4 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Lims1Q99JW4 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.96□□□□□ -0.33
Lims1Q99JW4 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lims1Q99JW4 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lims1Q99JW4 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lims1Q99JW4 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.96□□□□□ -0.33
Lims1Q99JW4 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Lims1Q99JW4 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.96□□□□□ -0.34
Lims1Q99JW4 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lims1Q99JW4 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lims1Q99JW4 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lims1Q99JW4 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lims1Q99JW4 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lims1Q99JW4 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Lims1Q99JW4 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lims1Q99JW4 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Lims1Q99JW4 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Lims1Q99JW4 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lims1Q99JW4 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lims1Q99JW4 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lims1Q99JW4 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lims1Q99JW4 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lims1Q99JW4 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Lims1Q99JW4 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lims1Q99JW4 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lims1Q99JW4 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lims1Q99JW4 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Lims1Q99JW4 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.95□□□□□ -0.34
Lims1Q99JW4 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lims1Q99JW4 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms