Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb2Q91Y00 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb2Q91Y00 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb2Q91Y00 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb2Q91Y00 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb2Q91Y00 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb2Q91Y00 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb2Q91Y00 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.15■□□□□ 0.02
Pcdhb2Q91Y00 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb2Q91Y00 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb2Q91Y00 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb2Q91Y00 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.15■□□□□ 0.02
Pcdhb2Q91Y00 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb2Q91Y00 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.15■□□□□ 0.02
Pcdhb2Q91Y00 Gm45751-201ENSMUST00000210185 1573 ntBASIC15.15■□□□□ 0.02
Pcdhb2Q91Y00 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb2Q91Y00 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb2Q91Y00 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb2Q91Y00 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb2Q91Y00 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb2Q91Y00 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb2Q91Y00 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb2Q91Y00 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb2Q91Y00 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb2Q91Y00 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb2Q91Y00 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb2Q91Y00 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb2Q91Y00 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.14■□□□□ 0.01
Pcdhb2Q91Y00 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb2Q91Y00 Gm15653-201ENSMUST00000119247 907 ntBASIC15.14■□□□□ 0.01
Pcdhb2Q91Y00 Gm14057-201ENSMUST00000120631 482 ntBASIC15.14■□□□□ 0.01
Pcdhb2Q91Y00 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb2Q91Y00 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb2Q91Y00 Gm20949-201ENSMUST00000206478 952 ntBASIC15.14■□□□□ 0.01
Pcdhb2Q91Y00 Shd-206ENSMUST00000225145 998 ntBASIC15.14■□□□□ 0.01
Pcdhb2Q91Y00 AC158982.1-201ENSMUST00000228377 901 ntBASIC15.14■□□□□ 0.01
Pcdhb2Q91Y00 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb2Q91Y00 Mir125a-201ENSMUST00000083545 68 ntBASIC15.14■□□□□ 0.01
Pcdhb2Q91Y00 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb2Q91Y00 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb2Q91Y00 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb2Q91Y00 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb2Q91Y00 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Pcdhb2Q91Y00 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Pcdhb2Q91Y00 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb2Q91Y00 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb2Q91Y00 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Pcdhb2Q91Y00 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb2Q91Y00 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb2Q91Y00 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb2Q91Y00 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Pcdhb2Q91Y00 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb2Q91Y00 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb2Q91Y00 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb2Q91Y00 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb2Q91Y00 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb2Q91Y00 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb2Q91Y00 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC15.13■□□□□ 0.01
Pcdhb2Q91Y00 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb2Q91Y00 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC15.13■□□□□ 0.01
Pcdhb2Q91Y00 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Pcdhb2Q91Y00 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb2Q91Y00 Gm16476-201ENSMUST00000221544 139 ntBASIC15.13■□□□□ 0.01
Pcdhb2Q91Y00 AC121598.1-201ENSMUST00000228224 1019 ntBASIC15.13■□□□□ 0.01
Pcdhb2Q91Y00 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb2Q91Y00 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb2Q91Y00 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb2Q91Y00 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb2Q91Y00 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb2Q91Y00 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb2Q91Y00 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb2Q91Y00 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb2Q91Y00 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb2Q91Y00 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb2Q91Y00 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Pcdhb2Q91Y00 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb2Q91Y00 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb2Q91Y00 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Pcdhb2Q91Y00 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC15.12■□□□□ 0.01
Pcdhb2Q91Y00 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Pcdhb2Q91Y00 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb2Q91Y00 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb2Q91Y00 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15.12■□□□□ 0.01
Pcdhb2Q91Y00 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb2Q91Y00 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb2Q91Y00 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb2Q91Y00 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb2Q91Y00 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb2Q91Y00 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb2Q91Y00 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb2Q91Y00 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC15.12■□□□□ 0.01
Pcdhb2Q91Y00 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC15.12■□□□□ 0.01
Pcdhb2Q91Y00 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb2Q91Y00 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Pcdhb2Q91Y00 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb2Q91Y00 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb2Q91Y00 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb2Q91Y00 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb2Q91Y00 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb2Q91Y00 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms