Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb6Q91XZ4 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb6Q91XZ4 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb6Q91XZ4 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Pcdhb6Q91XZ4 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb6Q91XZ4 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.64□□□□□ -0.07
Pcdhb6Q91XZ4 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb6Q91XZ4 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb6Q91XZ4 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Pcdhb6Q91XZ4 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Pcdhb6Q91XZ4 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb6Q91XZ4 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Pcdhb6Q91XZ4 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb6Q91XZ4 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb6Q91XZ4 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.64□□□□□ -0.07
Pcdhb6Q91XZ4 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
Pcdhb6Q91XZ4 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Pcdhb6Q91XZ4 Gm15693-201ENSMUST00000120470 637 ntBASIC14.64□□□□□ -0.07
Pcdhb6Q91XZ4 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.64□□□□□ -0.07
Pcdhb6Q91XZ4 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb6Q91XZ4 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb6Q91XZ4 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Pcdhb6Q91XZ4 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.64□□□□□ -0.07
Pcdhb6Q91XZ4 Gm24158-201ENSMUST00000175263 71 ntBASIC14.64□□□□□ -0.07
Pcdhb6Q91XZ4 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.64□□□□□ -0.07
Pcdhb6Q91XZ4 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Pcdhb6Q91XZ4 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Pcdhb6Q91XZ4 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb6Q91XZ4 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb6Q91XZ4 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.64□□□□□ -0.07
Pcdhb6Q91XZ4 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
Pcdhb6Q91XZ4 Gm8396-201ENSMUST00000057361 823 ntBASIC14.64□□□□□ -0.07
Pcdhb6Q91XZ4 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb6Q91XZ4 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb6Q91XZ4 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb6Q91XZ4 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb6Q91XZ4 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb6Q91XZ4 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb6Q91XZ4 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Pcdhb6Q91XZ4 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Pcdhb6Q91XZ4 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb6Q91XZ4 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Pcdhb6Q91XZ4 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb6Q91XZ4 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb6Q91XZ4 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb6Q91XZ4 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb6Q91XZ4 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb6Q91XZ4 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb6Q91XZ4 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb6Q91XZ4 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Pcdhb6Q91XZ4 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.63□□□□□ -0.07
Pcdhb6Q91XZ4 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb6Q91XZ4 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Pcdhb6Q91XZ4 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Pcdhb6Q91XZ4 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.63□□□□□ -0.07
Pcdhb6Q91XZ4 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.63□□□□□ -0.07
Pcdhb6Q91XZ4 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb6Q91XZ4 Gm10253-201ENSMUST00000194270 940 ntBASIC14.63□□□□□ -0.07
Pcdhb6Q91XZ4 Gm43575-201ENSMUST00000196420 516 ntBASIC14.63□□□□□ -0.07
Pcdhb6Q91XZ4 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb6Q91XZ4 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb6Q91XZ4 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb6Q91XZ4 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Pcdhb6Q91XZ4 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Pcdhb6Q91XZ4 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb6Q91XZ4 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb6Q91XZ4 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
Pcdhb6Q91XZ4 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.63□□□□□ -0.07
Pcdhb6Q91XZ4 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb6Q91XZ4 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb6Q91XZ4 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Pcdhb6Q91XZ4 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb6Q91XZ4 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Pcdhb6Q91XZ4 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Pcdhb6Q91XZ4 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb6Q91XZ4 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb6Q91XZ4 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb6Q91XZ4 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Pcdhb6Q91XZ4 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb6Q91XZ4 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb6Q91XZ4 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Pcdhb6Q91XZ4 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb6Q91XZ4 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Pcdhb6Q91XZ4 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb6Q91XZ4 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Pcdhb6Q91XZ4 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb6Q91XZ4 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.62□□□□□ -0.07
Pcdhb6Q91XZ4 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb6Q91XZ4 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb6Q91XZ4 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdhb6Q91XZ4 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb6Q91XZ4 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb6Q91XZ4 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb6Q91XZ4 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb6Q91XZ4 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb6Q91XZ4 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb6Q91XZ4 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb6Q91XZ4 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb6Q91XZ4 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb6Q91XZ4 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms