Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Gm4875-201ENSMUST00000118257 786 ntBASIC16.84■□□□□ 0.29
Rbm28Q8CGC6 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rbm28Q8CGC6 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rbm28Q8CGC6 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rbm28Q8CGC6 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.84■□□□□ 0.29
Rbm28Q8CGC6 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rbm28Q8CGC6 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rbm28Q8CGC6 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Rbm28Q8CGC6 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rbm28Q8CGC6 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rbm28Q8CGC6 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rbm28Q8CGC6 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Rbm28Q8CGC6 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Rbm28Q8CGC6 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Rbm28Q8CGC6 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rbm28Q8CGC6 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rbm28Q8CGC6 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
Rbm28Q8CGC6 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.29
Rbm28Q8CGC6 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Rbm28Q8CGC6 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rbm28Q8CGC6 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
Rbm28Q8CGC6 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Rbm28Q8CGC6 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rbm28Q8CGC6 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rbm28Q8CGC6 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rbm28Q8CGC6 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rbm28Q8CGC6 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rbm28Q8CGC6 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rbm28Q8CGC6 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rbm28Q8CGC6 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rbm28Q8CGC6 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rbm28Q8CGC6 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rbm28Q8CGC6 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rbm28Q8CGC6 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rbm28Q8CGC6 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Rbm28Q8CGC6 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Rbm28Q8CGC6 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Rbm28Q8CGC6 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rbm28Q8CGC6 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rbm28Q8CGC6 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rbm28Q8CGC6 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rbm28Q8CGC6 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rbm28Q8CGC6 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC16.82■□□□□ 0.28
Rbm28Q8CGC6 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
Rbm28Q8CGC6 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rbm28Q8CGC6 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rbm28Q8CGC6 Gm43509-201ENSMUST00000196551 2594 ntBASIC16.82■□□□□ 0.28
Rbm28Q8CGC6 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Rbm28Q8CGC6 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rbm28Q8CGC6 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rbm28Q8CGC6 Gm5745-201ENSMUST00000183748 313 ntBASIC16.82■□□□□ 0.28
Rbm28Q8CGC6 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rbm28Q8CGC6 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rbm28Q8CGC6 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rbm28Q8CGC6 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rbm28Q8CGC6 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rbm28Q8CGC6 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rbm28Q8CGC6 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Rbm28Q8CGC6 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rbm28Q8CGC6 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Rbm28Q8CGC6 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Rbm28Q8CGC6 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC16.82■□□□□ 0.28
Rbm28Q8CGC6 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Rbm28Q8CGC6 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rbm28Q8CGC6 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rbm28Q8CGC6 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rbm28Q8CGC6 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rbm28Q8CGC6 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rbm28Q8CGC6 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Rbm28Q8CGC6 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rbm28Q8CGC6 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rbm28Q8CGC6 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rbm28Q8CGC6 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rbm28Q8CGC6 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rbm28Q8CGC6 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
Rbm28Q8CGC6 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rbm28Q8CGC6 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC16.81■□□□□ 0.28
Rbm28Q8CGC6 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC16.81■□□□□ 0.28
Rbm28Q8CGC6 Gm29667-201ENSMUST00000190817 490 ntBASIC16.81■□□□□ 0.28
Rbm28Q8CGC6 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC16.81■□□□□ 0.28
Rbm28Q8CGC6 AC135669.1-201ENSMUST00000213585 412 ntBASIC16.81■□□□□ 0.28
Rbm28Q8CGC6 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rbm28Q8CGC6 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Rbm28Q8CGC6 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rbm28Q8CGC6 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rbm28Q8CGC6 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rbm28Q8CGC6 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC16.81■□□□□ 0.28
Rbm28Q8CGC6 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC16.81■□□□□ 0.28
Rbm28Q8CGC6 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rbm28Q8CGC6 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rbm28Q8CGC6 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Rbm28Q8CGC6 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Rbm28Q8CGC6 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rbm28Q8CGC6 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rbm28Q8CGC6 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rbm28Q8CGC6 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rbm28Q8CGC6 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rbm28Q8CGC6 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Rbm28Q8CGC6 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Rbm28Q8CGC6 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms