Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc28bQ8CEG5 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc28bQ8CEG5 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc28bQ8CEG5 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc28bQ8CEG5 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc28bQ8CEG5 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc28bQ8CEG5 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Ccdc28bQ8CEG5 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc28bQ8CEG5 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc28bQ8CEG5 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc28bQ8CEG5 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc28bQ8CEG5 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc28bQ8CEG5 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc28bQ8CEG5 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc28bQ8CEG5 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc28bQ8CEG5 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc28bQ8CEG5 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc28bQ8CEG5 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc28bQ8CEG5 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Ccdc28bQ8CEG5 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc28bQ8CEG5 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc28bQ8CEG5 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc28bQ8CEG5 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc28bQ8CEG5 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc28bQ8CEG5 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc28bQ8CEG5 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc28bQ8CEG5 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.09□□□□□ -0.15
Ccdc28bQ8CEG5 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc28bQ8CEG5 Gm25990-201ENSMUST00000102440 86 ntBASIC14.09□□□□□ -0.15
Ccdc28bQ8CEG5 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc28bQ8CEG5 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.09□□□□□ -0.15
Ccdc28bQ8CEG5 Gm44357-201ENSMUST00000195897 142 ntBASIC14.09□□□□□ -0.15
Ccdc28bQ8CEG5 Gm19658-201ENSMUST00000196231 138 ntBASIC14.09□□□□□ -0.15
Ccdc28bQ8CEG5 Gm44367-201ENSMUST00000196836 138 ntBASIC14.09□□□□□ -0.15
Ccdc28bQ8CEG5 Gm44350-201ENSMUST00000197197 138 ntBASIC14.09□□□□□ -0.15
Ccdc28bQ8CEG5 Gm44390-201ENSMUST00000197533 144 ntBASIC14.09□□□□□ -0.15
Ccdc28bQ8CEG5 Gm44313-201ENSMUST00000198018 138 ntBASIC14.09□□□□□ -0.15
Ccdc28bQ8CEG5 Gm44486-201ENSMUST00000198508 138 ntBASIC14.09□□□□□ -0.15
Ccdc28bQ8CEG5 Gm44314-201ENSMUST00000199263 138 ntBASIC14.09□□□□□ -0.15
Ccdc28bQ8CEG5 Gm2451-201ENSMUST00000199447 999 ntBASIC14.09□□□□□ -0.15
Ccdc28bQ8CEG5 Gm44394-201ENSMUST00000199558 138 ntBASIC14.09□□□□□ -0.15
Ccdc28bQ8CEG5 Gm44484-201ENSMUST00000199873 138 ntBASIC14.09□□□□□ -0.15
Ccdc28bQ8CEG5 Gm44466-201ENSMUST00000200264 138 ntBASIC14.09□□□□□ -0.15
Ccdc28bQ8CEG5 Gm10290-201ENSMUST00000200451 999 ntBASIC14.09□□□□□ -0.15
Ccdc28bQ8CEG5 Gm44359-201ENSMUST00000200671 138 ntBASIC14.09□□□□□ -0.15
Ccdc28bQ8CEG5 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc28bQ8CEG5 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc28bQ8CEG5 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc28bQ8CEG5 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc28bQ8CEG5 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Ccdc28bQ8CEG5 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc28bQ8CEG5 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc28bQ8CEG5 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc28bQ8CEG5 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc28bQ8CEG5 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc28bQ8CEG5 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.09□□□□□ -0.15
Ccdc28bQ8CEG5 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14.09□□□□□ -0.15
Ccdc28bQ8CEG5 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc28bQ8CEG5 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc28bQ8CEG5 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc28bQ8CEG5 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc28bQ8CEG5 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc28bQ8CEG5 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.08□□□□□ -0.15
Ccdc28bQ8CEG5 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc28bQ8CEG5 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.08□□□□□ -0.15
Ccdc28bQ8CEG5 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.08□□□□□ -0.15
Ccdc28bQ8CEG5 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc28bQ8CEG5 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc28bQ8CEG5 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc28bQ8CEG5 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc28bQ8CEG5 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc28bQ8CEG5 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc28bQ8CEG5 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc28bQ8CEG5 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc28bQ8CEG5 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc28bQ8CEG5 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc28bQ8CEG5 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc28bQ8CEG5 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.08□□□□□ -0.16
Ccdc28bQ8CEG5 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc28bQ8CEG5 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc28bQ8CEG5 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.08□□□□□ -0.16
Ccdc28bQ8CEG5 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
Ccdc28bQ8CEG5 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc28bQ8CEG5 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc28bQ8CEG5 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc28bQ8CEG5 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc28bQ8CEG5 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc28bQ8CEG5 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc28bQ8CEG5 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.08□□□□□ -0.16
Ccdc28bQ8CEG5 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc28bQ8CEG5 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc28bQ8CEG5 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc28bQ8CEG5 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc28bQ8CEG5 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc28bQ8CEG5 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28bQ8CEG5 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28bQ8CEG5 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ccdc28bQ8CEG5 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28bQ8CEG5 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28bQ8CEG5 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms