Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sh3rf3Q8C120 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Sh3rf3Q8C120 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sh3rf3Q8C120 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.87□□□□□ -0.03
Sh3rf3Q8C120 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sh3rf3Q8C120 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sh3rf3Q8C120 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.87□□□□□ -0.03
Sh3rf3Q8C120 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sh3rf3Q8C120 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sh3rf3Q8C120 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sh3rf3Q8C120 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.86□□□□□ -0.03
Sh3rf3Q8C120 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Sh3rf3Q8C120 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Sh3rf3Q8C120 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh3rf3Q8C120 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh3rf3Q8C120 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh3rf3Q8C120 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Sh3rf3Q8C120 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh3rf3Q8C120 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh3rf3Q8C120 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh3rf3Q8C120 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh3rf3Q8C120 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.86□□□□□ -0.03
Sh3rf3Q8C120 Gm18737-201ENSMUST00000173594 937 ntBASIC14.86□□□□□ -0.03
Sh3rf3Q8C120 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.86□□□□□ -0.03
Sh3rf3Q8C120 Gm37935-201ENSMUST00000192012 982 ntBASIC14.86□□□□□ -0.03
Sh3rf3Q8C120 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.86□□□□□ -0.03
Sh3rf3Q8C120 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh3rf3Q8C120 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Sh3rf3Q8C120 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh3rf3Q8C120 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh3rf3Q8C120 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh3rf3Q8C120 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh3rf3Q8C120 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh3rf3Q8C120 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh3rf3Q8C120 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh3rf3Q8C120 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh3rf3Q8C120 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh3rf3Q8C120 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh3rf3Q8C120 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh3rf3Q8C120 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sh3rf3Q8C120 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh3rf3Q8C120 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh3rf3Q8C120 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sh3rf3Q8C120 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh3rf3Q8C120 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh3rf3Q8C120 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.85□□□□□ -0.03
Sh3rf3Q8C120 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh3rf3Q8C120 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.85□□□□□ -0.03
Sh3rf3Q8C120 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Sh3rf3Q8C120 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh3rf3Q8C120 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sh3rf3Q8C120 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sh3rf3Q8C120 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh3rf3Q8C120 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sh3rf3Q8C120 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Sh3rf3Q8C120 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.85□□□□□ -0.03
Sh3rf3Q8C120 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.85□□□□□ -0.03
Sh3rf3Q8C120 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh3rf3Q8C120 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh3rf3Q8C120 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh3rf3Q8C120 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh3rf3Q8C120 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Sh3rf3Q8C120 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.85□□□□□ -0.03
Sh3rf3Q8C120 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh3rf3Q8C120 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh3rf3Q8C120 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.84□□□□□ -0.03
Sh3rf3Q8C120 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Sh3rf3Q8C120 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh3rf3Q8C120 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh3rf3Q8C120 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh3rf3Q8C120 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sh3rf3Q8C120 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Sh3rf3Q8C120 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Sh3rf3Q8C120 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh3rf3Q8C120 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sh3rf3Q8C120 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Sh3rf3Q8C120 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh3rf3Q8C120 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.84□□□□□ -0.03
Sh3rf3Q8C120 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.84□□□□□ -0.03
Sh3rf3Q8C120 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.84□□□□□ -0.03
Sh3rf3Q8C120 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.84□□□□□ -0.03
Sh3rf3Q8C120 Gm2756-201ENSMUST00000195851 400 ntBASIC14.84□□□□□ -0.03
Sh3rf3Q8C120 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.84□□□□□ -0.03
Sh3rf3Q8C120 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sh3rf3Q8C120 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh3rf3Q8C120 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sh3rf3Q8C120 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh3rf3Q8C120 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh3rf3Q8C120 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh3rf3Q8C120 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh3rf3Q8C120 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sh3rf3Q8C120 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh3rf3Q8C120 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh3rf3Q8C120 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh3rf3Q8C120 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sh3rf3Q8C120 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sh3rf3Q8C120 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Sh3rf3Q8C120 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
Sh3rf3Q8C120 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sh3rf3Q8C120 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms