Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sh3rf2Q8BZT2 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Sh3rf2Q8BZT2 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sh3rf2Q8BZT2 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.42□□□□□ -0.1
Sh3rf2Q8BZT2 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sh3rf2Q8BZT2 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sh3rf2Q8BZT2 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sh3rf2Q8BZT2 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sh3rf2Q8BZT2 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sh3rf2Q8BZT2 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sh3rf2Q8BZT2 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sh3rf2Q8BZT2 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Sh3rf2Q8BZT2 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sh3rf2Q8BZT2 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.42□□□□□ -0.1
Sh3rf2Q8BZT2 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.42□□□□□ -0.1
Sh3rf2Q8BZT2 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.42□□□□□ -0.1
Sh3rf2Q8BZT2 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sh3rf2Q8BZT2 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.42□□□□□ -0.1
Sh3rf2Q8BZT2 Gm18018-201ENSMUST00000198273 408 ntBASIC14.42□□□□□ -0.1
Sh3rf2Q8BZT2 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.42□□□□□ -0.1
Sh3rf2Q8BZT2 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sh3rf2Q8BZT2 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sh3rf2Q8BZT2 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sh3rf2Q8BZT2 Gm15823-201ENSMUST00000064305 670 ntBASIC14.42□□□□□ -0.1
Sh3rf2Q8BZT2 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sh3rf2Q8BZT2 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sh3rf2Q8BZT2 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sh3rf2Q8BZT2 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sh3rf2Q8BZT2 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sh3rf2Q8BZT2 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Sh3rf2Q8BZT2 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Sh3rf2Q8BZT2 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Sh3rf2Q8BZT2 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sh3rf2Q8BZT2 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sh3rf2Q8BZT2 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sh3rf2Q8BZT2 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sh3rf2Q8BZT2 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sh3rf2Q8BZT2 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sh3rf2Q8BZT2 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Sh3rf2Q8BZT2 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.41□□□□□ -0.1
Sh3rf2Q8BZT2 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Sh3rf2Q8BZT2 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.41□□□□□ -0.1
Sh3rf2Q8BZT2 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.41□□□□□ -0.1
Sh3rf2Q8BZT2 Gm12091-201ENSMUST00000146791 830 ntBASIC14.41□□□□□ -0.1
Sh3rf2Q8BZT2 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sh3rf2Q8BZT2 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.41□□□□□ -0.1
Sh3rf2Q8BZT2 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.41□□□□□ -0.1
Sh3rf2Q8BZT2 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Sh3rf2Q8BZT2 Gm45668-201ENSMUST00000211271 493 ntBASIC14.41□□□□□ -0.1
Sh3rf2Q8BZT2 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sh3rf2Q8BZT2 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sh3rf2Q8BZT2 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.41□□□□□ -0.1
Sh3rf2Q8BZT2 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Sh3rf2Q8BZT2 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sh3rf2Q8BZT2 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sh3rf2Q8BZT2 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Sh3rf2Q8BZT2 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sh3rf2Q8BZT2 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.41□□□□□ -0.1
Sh3rf2Q8BZT2 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sh3rf2Q8BZT2 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sh3rf2Q8BZT2 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Sh3rf2Q8BZT2 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sh3rf2Q8BZT2 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sh3rf2Q8BZT2 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sh3rf2Q8BZT2 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.41□□□□□ -0.1
Sh3rf2Q8BZT2 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sh3rf2Q8BZT2 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sh3rf2Q8BZT2 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.4□□□□□ -0.1
Sh3rf2Q8BZT2 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sh3rf2Q8BZT2 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sh3rf2Q8BZT2 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sh3rf2Q8BZT2 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.4□□□□□ -0.1
Sh3rf2Q8BZT2 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sh3rf2Q8BZT2 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sh3rf2Q8BZT2 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sh3rf2Q8BZT2 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Sh3rf2Q8BZT2 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Sh3rf2Q8BZT2 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.4□□□□□ -0.1
Sh3rf2Q8BZT2 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Sh3rf2Q8BZT2 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sh3rf2Q8BZT2 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.4□□□□□ -0.1
Sh3rf2Q8BZT2 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.4□□□□□ -0.1
Sh3rf2Q8BZT2 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sh3rf2Q8BZT2 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sh3rf2Q8BZT2 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sh3rf2Q8BZT2 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sh3rf2Q8BZT2 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sh3rf2Q8BZT2 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sh3rf2Q8BZT2 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sh3rf2Q8BZT2 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.4□□□□□ -0.1
Sh3rf2Q8BZT2 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sh3rf2Q8BZT2 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sh3rf2Q8BZT2 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Sh3rf2Q8BZT2 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Sh3rf2Q8BZT2 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sh3rf2Q8BZT2 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sh3rf2Q8BZT2 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sh3rf2Q8BZT2 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sh3rf2Q8BZT2 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.11
Sh3rf2Q8BZT2 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms