Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chd9Q8BYH8 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd9Q8BYH8 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC11.1□□□□□ -0.63
Chd9Q8BYH8 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd9Q8BYH8 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC11.09□□□□□ -0.63
Chd9Q8BYH8 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Chd9Q8BYH8 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Chd9Q8BYH8 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd9Q8BYH8 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd9Q8BYH8 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd9Q8BYH8 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chd9Q8BYH8 Gm11675-201ENSMUST00000121873 832 ntBASIC11.09□□□□□ -0.63
Chd9Q8BYH8 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Chd9Q8BYH8 Gm17889-201ENSMUST00000198410 598 ntBASIC11.09□□□□□ -0.63
Chd9Q8BYH8 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.09□□□□□ -0.63
Chd9Q8BYH8 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC11.09□□□□□ -0.63
Chd9Q8BYH8 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd9Q8BYH8 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd9Q8BYH8 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd9Q8BYH8 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd9Q8BYH8 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chd9Q8BYH8 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC11.09□□□□□ -0.63
Chd9Q8BYH8 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chd9Q8BYH8 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd9Q8BYH8 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Chd9Q8BYH8 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd9Q8BYH8 Gm9083-201ENSMUST00000120423 819 ntBASIC11.09□□□□□ -0.63
Chd9Q8BYH8 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.09□□□□□ -0.63
Chd9Q8BYH8 AC153872.1-201ENSMUST00000199539 128 ntBASIC11.09□□□□□ -0.63
Chd9Q8BYH8 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC11.09□□□□□ -0.63
Chd9Q8BYH8 Gm19208-201ENSMUST00000213861 912 ntBASIC11.09□□□□□ -0.63
Chd9Q8BYH8 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd9Q8BYH8 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd9Q8BYH8 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd9Q8BYH8 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd9Q8BYH8 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chd9Q8BYH8 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd9Q8BYH8 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd9Q8BYH8 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Chd9Q8BYH8 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chd9Q8BYH8 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.08□□□□□ -0.64
Chd9Q8BYH8 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd9Q8BYH8 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd9Q8BYH8 BC037039-201ENSMUST00000192003 2205 ntBASIC11.08□□□□□ -0.64
Chd9Q8BYH8 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.08□□□□□ -0.64
Chd9Q8BYH8 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd9Q8BYH8 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chd9Q8BYH8 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd9Q8BYH8 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd9Q8BYH8 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd9Q8BYH8 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.08□□□□□ -0.64
Chd9Q8BYH8 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd9Q8BYH8 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd9Q8BYH8 Gm14028-201ENSMUST00000117434 479 ntBASIC11.08□□□□□ -0.64
Chd9Q8BYH8 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chd9Q8BYH8 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd9Q8BYH8 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Chd9Q8BYH8 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.08□□□□□ -0.64
Chd9Q8BYH8 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd9Q8BYH8 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chd9Q8BYH8 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd9Q8BYH8 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd9Q8BYH8 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chd9Q8BYH8 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd9Q8BYH8 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chd9Q8BYH8 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chd9Q8BYH8 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chd9Q8BYH8 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.07□□□□□ -0.64
Chd9Q8BYH8 Gm12217-201ENSMUST00000118858 696 ntBASIC11.07□□□□□ -0.64
Chd9Q8BYH8 Gm11331-201ENSMUST00000119764 288 ntBASIC11.07□□□□□ -0.64
Chd9Q8BYH8 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.07□□□□□ -0.64
Chd9Q8BYH8 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC11.07□□□□□ -0.64
Chd9Q8BYH8 Gm42779-201ENSMUST00000198807 406 ntBASIC11.07□□□□□ -0.64
Chd9Q8BYH8 Gm29705-201ENSMUST00000212598 474 ntBASIC11.07□□□□□ -0.64
Chd9Q8BYH8 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd9Q8BYH8 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Chd9Q8BYH8 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Chd9Q8BYH8 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Chd9Q8BYH8 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd9Q8BYH8 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd9Q8BYH8 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd9Q8BYH8 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd9Q8BYH8 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Chd9Q8BYH8 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Chd9Q8BYH8 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd9Q8BYH8 Gm11667-201ENSMUST00000119828 486 ntBASIC11.07□□□□□ -0.64
Chd9Q8BYH8 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.07□□□□□ -0.64
Chd9Q8BYH8 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chd9Q8BYH8 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chd9Q8BYH8 Gm20392-201ENSMUST00000173047 701 ntBASIC11.07□□□□□ -0.64
Chd9Q8BYH8 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.07□□□□□ -0.64
Chd9Q8BYH8 Gm10608-202ENSMUST00000213924 676 ntBASIC11.07□□□□□ -0.64
Chd9Q8BYH8 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd9Q8BYH8 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC11.07□□□□□ -0.64
Chd9Q8BYH8 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chd9Q8BYH8 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd9Q8BYH8 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd9Q8BYH8 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd9Q8BYH8 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd9Q8BYH8 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms