Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ube3dQ8BX13 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ube3dQ8BX13 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ube3dQ8BX13 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ube3dQ8BX13 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ube3dQ8BX13 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.68□□□□□ -0.38
Ube3dQ8BX13 Gm18737-201ENSMUST00000173594 937 ntBASIC12.68□□□□□ -0.38
Ube3dQ8BX13 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ube3dQ8BX13 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.68□□□□□ -0.38
Ube3dQ8BX13 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.68□□□□□ -0.38
Ube3dQ8BX13 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ube3dQ8BX13 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ube3dQ8BX13 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ube3dQ8BX13 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ube3dQ8BX13 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.68□□□□□ -0.38
Ube3dQ8BX13 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.68□□□□□ -0.38
Ube3dQ8BX13 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ube3dQ8BX13 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ube3dQ8BX13 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ube3dQ8BX13 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ube3dQ8BX13 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ube3dQ8BX13 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ube3dQ8BX13 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ube3dQ8BX13 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ube3dQ8BX13 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ube3dQ8BX13 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Matn2-206ENSMUST00000228570 2798 ntBASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ube3dQ8BX13 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Gm22065-201ENSMUST00000103753 110 ntBASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Gm22066-201ENSMUST00000103761 110 ntBASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Gm24932-201ENSMUST00000103763 110 ntBASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Gm24115-201ENSMUST00000103799 110 ntBASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Gm22190-201ENSMUST00000103827 110 ntBASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Gm22191-201ENSMUST00000103831 110 ntBASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Gm25287-201ENSMUST00000103846 110 ntBASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Gm24721-201ENSMUST00000103849 110 ntBASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Gm22918-201ENSMUST00000103855 110 ntBASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Gm28018-201ENSMUST00000103869 110 ntBASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Gm26399-201ENSMUST00000103937 110 ntBASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Gm15483-201ENSMUST00000120338 456 ntBASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ube3dQ8BX13 AA543401-201ENSMUST00000164248 1269 ntBASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Gm25349-201ENSMUST00000177728 110 ntBASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Gm23616-201ENSMUST00000177797 110 ntBASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Gm25871-201ENSMUST00000177816 110 ntBASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Gm24752-201ENSMUST00000178240 110 ntBASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Gm24496-201ENSMUST00000178287 110 ntBASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Gm25649-201ENSMUST00000178476 110 ntBASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Gm25548-201ENSMUST00000178681 110 ntBASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Gm23147-201ENSMUST00000178841 110 ntBASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Gm26095-201ENSMUST00000179270 110 ntBASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Gm22171-201ENSMUST00000179283 110 ntBASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Gm23936-201ENSMUST00000179354 110 ntBASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Gm22619-201ENSMUST00000179516 110 ntBASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Gm25255-201ENSMUST00000179579 110 ntBASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Gm24755-201ENSMUST00000179691 110 ntBASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Gm26506-201ENSMUST00000179692 110 ntBASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Gm25086-201ENSMUST00000179931 110 ntBASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Gm23243-201ENSMUST00000180047 110 ntBASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Gm24659-201ENSMUST00000180212 110 ntBASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Gm24169-201ENSMUST00000180244 110 ntBASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Gm23689-201ENSMUST00000180354 110 ntBASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Gm27359-201ENSMUST00000184153 110 ntBASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Gm27785-201ENSMUST00000184268 110 ntBASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Gm27466-201ENSMUST00000184396 110 ntBASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Gm27703-201ENSMUST00000184836 110 ntBASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Gm10253-201ENSMUST00000194270 940 ntBASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ube3dQ8BX13 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ube3dQ8BX13 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms