Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nop53Q8BK35 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.3■□□□□ 0.04
Nop53Q8BK35 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nop53Q8BK35 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nop53Q8BK35 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nop53Q8BK35 Gm24513-201ENSMUST00000174964 138 ntBASIC15.3■□□□□ 0.04
Nop53Q8BK35 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nop53Q8BK35 Ndufaf2-202ENSMUST00000223734 556 ntBASIC15.3■□□□□ 0.04
Nop53Q8BK35 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nop53Q8BK35 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nop53Q8BK35 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nop53Q8BK35 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nop53Q8BK35 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nop53Q8BK35 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nop53Q8BK35 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Nop53Q8BK35 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nop53Q8BK35 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nop53Q8BK35 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Nop53Q8BK35 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nop53Q8BK35 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nop53Q8BK35 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nop53Q8BK35 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC15.29■□□□□ 0.04
Nop53Q8BK35 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nop53Q8BK35 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Nop53Q8BK35 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nop53Q8BK35 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Nop53Q8BK35 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nop53Q8BK35 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.29■□□□□ 0.04
Nop53Q8BK35 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nop53Q8BK35 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nop53Q8BK35 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nop53Q8BK35 Gm16198-201ENSMUST00000118766 670 ntBASIC15.29■□□□□ 0.04
Nop53Q8BK35 Gm43575-201ENSMUST00000196420 516 ntBASIC15.29■□□□□ 0.04
Nop53Q8BK35 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.29■□□□□ 0.04
Nop53Q8BK35 Thap2-203ENSMUST00000218989 527 ntBASIC15.29■□□□□ 0.04
Nop53Q8BK35 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.29■□□□□ 0.04
Nop53Q8BK35 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.29■□□□□ 0.04
Nop53Q8BK35 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nop53Q8BK35 Gm28182-201ENSMUST00000188354 2477 ntBASIC15.29■□□□□ 0.04
Nop53Q8BK35 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC15.29■□□□□ 0.04
Nop53Q8BK35 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15.29■□□□□ 0.04
Nop53Q8BK35 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nop53Q8BK35 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nop53Q8BK35 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nop53Q8BK35 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nop53Q8BK35 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nop53Q8BK35 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nop53Q8BK35 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nop53Q8BK35 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nop53Q8BK35 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Nop53Q8BK35 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nop53Q8BK35 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nop53Q8BK35 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nop53Q8BK35 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Nop53Q8BK35 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nop53Q8BK35 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nop53Q8BK35 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nop53Q8BK35 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nop53Q8BK35 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nop53Q8BK35 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nop53Q8BK35 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Nop53Q8BK35 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nop53Q8BK35 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nop53Q8BK35 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nop53Q8BK35 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nop53Q8BK35 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Nop53Q8BK35 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Nop53Q8BK35 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nop53Q8BK35 Gm23935-201ENSMUST00000102303 57 ntBASIC15.28■□□□□ 0.04
Nop53Q8BK35 Gm24270-201ENSMUST00000102326 57 ntBASIC15.28■□□□□ 0.04
Nop53Q8BK35 Gm24245-201ENSMUST00000157318 57 ntBASIC15.28■□□□□ 0.04
Nop53Q8BK35 Gm27397-201ENSMUST00000184997 107 ntBASIC15.28■□□□□ 0.04
Nop53Q8BK35 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.28■□□□□ 0.04
Nop53Q8BK35 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Nop53Q8BK35 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Nop53Q8BK35 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.28■□□□□ 0.04
Nop53Q8BK35 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nop53Q8BK35 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nop53Q8BK35 AC166574.6-201ENSMUST00000227889 1806 ntBASIC15.28■□□□□ 0.04
Nop53Q8BK35 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Nop53Q8BK35 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Nop53Q8BK35 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nop53Q8BK35 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nop53Q8BK35 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nop53Q8BK35 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Nop53Q8BK35 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Nop53Q8BK35 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nop53Q8BK35 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nop53Q8BK35 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.27■□□□□ 0.04
Nop53Q8BK35 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.27■□□□□ 0.04
Nop53Q8BK35 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.27■□□□□ 0.04
Nop53Q8BK35 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Nop53Q8BK35 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC15.27■□□□□ 0.04
Nop53Q8BK35 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Nop53Q8BK35 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nop53Q8BK35 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
Nop53Q8BK35 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.27■□□□□ 0.04
Nop53Q8BK35 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Nop53Q8BK35 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.27■□□□□ 0.04
Nop53Q8BK35 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms