Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cspg5Q71M36 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cspg5Q71M36 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cspg5Q71M36 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cspg5Q71M36 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cspg5Q71M36 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cspg5Q71M36 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cspg5Q71M36 Gm4875-201ENSMUST00000118257 786 ntBASIC14.79□□□□□ -0.04
Cspg5Q71M36 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cspg5Q71M36 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.79□□□□□ -0.04
Cspg5Q71M36 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.79□□□□□ -0.04
Cspg5Q71M36 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cspg5Q71M36 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.79□□□□□ -0.04
Cspg5Q71M36 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cspg5Q71M36 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cspg5Q71M36 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.79□□□□□ -0.04
Cspg5Q71M36 Gm45384-201ENSMUST00000210451 277 ntBASIC14.79□□□□□ -0.04
Cspg5Q71M36 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.79□□□□□ -0.04
Cspg5Q71M36 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Cspg5Q71M36 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Cspg5Q71M36 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.79□□□□□ -0.04
Cspg5Q71M36 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Cspg5Q71M36 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cspg5Q71M36 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cspg5Q71M36 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cspg5Q71M36 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cspg5Q71M36 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Cspg5Q71M36 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Cspg5Q71M36 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cspg5Q71M36 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cspg5Q71M36 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Cspg5Q71M36 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cspg5Q71M36 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cspg5Q71M36 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cspg5Q71M36 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cspg5Q71M36 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Cspg5Q71M36 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.79□□□□□ -0.04
Cspg5Q71M36 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.78□□□□□ -0.04
Cspg5Q71M36 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.78□□□□□ -0.04
Cspg5Q71M36 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cspg5Q71M36 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cspg5Q71M36 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cspg5Q71M36 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.78□□□□□ -0.04
Cspg5Q71M36 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cspg5Q71M36 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cspg5Q71M36 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.78□□□□□ -0.04
Cspg5Q71M36 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cspg5Q71M36 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cspg5Q71M36 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.78□□□□□ -0.04
Cspg5Q71M36 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cspg5Q71M36 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.78□□□□□ -0.04
Cspg5Q71M36 Gm11478-201ENSMUST00000117851 599 ntBASIC14.78□□□□□ -0.04
Cspg5Q71M36 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.78□□□□□ -0.04
Cspg5Q71M36 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.78□□□□□ -0.04
Cspg5Q71M36 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Cspg5Q71M36 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.78□□□□□ -0.04
Cspg5Q71M36 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cspg5Q71M36 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Cspg5Q71M36 Gm20445-201ENSMUST00000061905 565 ntBASIC14.78□□□□□ -0.04
Cspg5Q71M36 Gm6180-201ENSMUST00000065243 498 ntBASIC14.78□□□□□ -0.04
Cspg5Q71M36 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Cspg5Q71M36 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cspg5Q71M36 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cspg5Q71M36 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cspg5Q71M36 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Cspg5Q71M36 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cspg5Q71M36 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cspg5Q71M36 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cspg5Q71M36 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Cspg5Q71M36 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cspg5Q71M36 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cspg5Q71M36 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cspg5Q71M36 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cspg5Q71M36 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cspg5Q71M36 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Cspg5Q71M36 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Cspg5Q71M36 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cspg5Q71M36 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cspg5Q71M36 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cspg5Q71M36 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.77□□□□□ -0.04
Cspg5Q71M36 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cspg5Q71M36 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.77□□□□□ -0.04
Cspg5Q71M36 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Cspg5Q71M36 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Cspg5Q71M36 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cspg5Q71M36 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.77□□□□□ -0.05
Cspg5Q71M36 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cspg5Q71M36 Gm8515-201ENSMUST00000194852 576 ntBASIC14.77□□□□□ -0.05
Cspg5Q71M36 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Cspg5Q71M36 Gm9908-201ENSMUST00000211534 448 ntBASIC14.77□□□□□ -0.05
Cspg5Q71M36 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cspg5Q71M36 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Cspg5Q71M36 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Cspg5Q71M36 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cspg5Q71M36 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.77□□□□□ -0.05
Cspg5Q71M36 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cspg5Q71M36 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cspg5Q71M36 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Cspg5Q71M36 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cspg5Q71M36 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms