Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hmgb4Q6P8W9 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hmgb4Q6P8W9 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hmgb4Q6P8W9 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Hmgb4Q6P8W9 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hmgb4Q6P8W9 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hmgb4Q6P8W9 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hmgb4Q6P8W9 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hmgb4Q6P8W9 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Hmgb4Q6P8W9 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Hmgb4Q6P8W9 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hmgb4Q6P8W9 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hmgb4Q6P8W9 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hmgb4Q6P8W9 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.94□□□□□ -0.02
Hmgb4Q6P8W9 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hmgb4Q6P8W9 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.94□□□□□ -0.02
Hmgb4Q6P8W9 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.94□□□□□ -0.02
Hmgb4Q6P8W9 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.94□□□□□ -0.02
Hmgb4Q6P8W9 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.94□□□□□ -0.02
Hmgb4Q6P8W9 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
Hmgb4Q6P8W9 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.94□□□□□ -0.02
Hmgb4Q6P8W9 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hmgb4Q6P8W9 Gm27838-201ENSMUST00000184829 128 ntBASIC14.94□□□□□ -0.02
Hmgb4Q6P8W9 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.94□□□□□ -0.02
Hmgb4Q6P8W9 Gm46209-201ENSMUST00000217912 553 ntBASIC14.94□□□□□ -0.02
Hmgb4Q6P8W9 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hmgb4Q6P8W9 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hmgb4Q6P8W9 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Hmgb4Q6P8W9 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hmgb4Q6P8W9 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hmgb4Q6P8W9 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hmgb4Q6P8W9 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Hmgb4Q6P8W9 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Hmgb4Q6P8W9 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Hmgb4Q6P8W9 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
Hmgb4Q6P8W9 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgb4Q6P8W9 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgb4Q6P8W9 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.93□□□□□ -0.02
Hmgb4Q6P8W9 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgb4Q6P8W9 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Hmgb4Q6P8W9 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgb4Q6P8W9 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgb4Q6P8W9 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgb4Q6P8W9 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgb4Q6P8W9 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgb4Q6P8W9 Gm7488-201ENSMUST00000117148 684 ntBASIC14.93□□□□□ -0.02
Hmgb4Q6P8W9 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.93□□□□□ -0.02
Hmgb4Q6P8W9 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgb4Q6P8W9 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.93□□□□□ -0.02
Hmgb4Q6P8W9 Gm2451-201ENSMUST00000199447 999 ntBASIC14.93□□□□□ -0.02
Hmgb4Q6P8W9 Gm10290-201ENSMUST00000200451 999 ntBASIC14.93□□□□□ -0.02
Hmgb4Q6P8W9 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Hmgb4Q6P8W9 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC14.93□□□□□ -0.02
Hmgb4Q6P8W9 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgb4Q6P8W9 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgb4Q6P8W9 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.93□□□□□ -0.02
Hmgb4Q6P8W9 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgb4Q6P8W9 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Hmgb4Q6P8W9 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgb4Q6P8W9 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgb4Q6P8W9 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgb4Q6P8W9 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Carlr-201ENSMUST00000181515 2574 ntBASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Gm6222-201ENSMUST00000120787 396 ntBASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Gm29310-201ENSMUST00000185468 696 ntBASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Gm21825-201ENSMUST00000185728 696 ntBASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Gm29109-201ENSMUST00000185895 696 ntBASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Gm21896-201ENSMUST00000186520 696 ntBASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Gm21873-201ENSMUST00000186728 696 ntBASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Gm21794-201ENSMUST00000187056 696 ntBASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Gm21880-201ENSMUST00000187275 696 ntBASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Gm21826-201ENSMUST00000187451 696 ntBASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Gm21198-201ENSMUST00000188393 696 ntBASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Gm21749-201ENSMUST00000189343 696 ntBASIC14.92□□□□□ -0.02
Hmgb4Q6P8W9 Gm21901-201ENSMUST00000189568 696 ntBASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms