Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ctr9Q62018 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ctr9Q62018 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ctr9Q62018 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ctr9Q62018 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ctr9Q62018 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Ctr9Q62018 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ctr9Q62018 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ctr9Q62018 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ctr9Q62018 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ctr9Q62018 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ctr9Q62018 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ctr9Q62018 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Ctr9Q62018 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ctr9Q62018 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ctr9Q62018 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Ctr9Q62018 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Ctr9Q62018 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ctr9Q62018 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ctr9Q62018 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ctr9Q62018 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ctr9Q62018 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ctr9Q62018 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ctr9Q62018 Gm15321-201ENSMUST00000121290 288 ntBASIC16.79■□□□□ 0.28
Ctr9Q62018 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC16.79■□□□□ 0.28
Ctr9Q62018 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC16.79■□□□□ 0.28
Ctr9Q62018 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Ctr9Q62018 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ctr9Q62018 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ctr9Q62018 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ctr9Q62018 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Ctr9Q62018 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Ctr9Q62018 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Ctr9Q62018 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ctr9Q62018 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC16.79■□□□□ 0.28
Ctr9Q62018 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Ctr9Q62018 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ctr9Q62018 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ctr9Q62018 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ctr9Q62018 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Ctr9Q62018 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ctr9Q62018 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ctr9Q62018 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ctr9Q62018 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ctr9Q62018 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ctr9Q62018 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ctr9Q62018 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ctr9Q62018 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ctr9Q62018 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ctr9Q62018 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ctr9Q62018 Gm15957-201ENSMUST00000118893 974 ntBASIC16.78■□□□□ 0.28
Ctr9Q62018 Gm7820-201ENSMUST00000121012 1052 ntBASIC16.78■□□□□ 0.28
Ctr9Q62018 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ctr9Q62018 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ctr9Q62018 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC16.78■□□□□ 0.28
Ctr9Q62018 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC16.78■□□□□ 0.28
Ctr9Q62018 AC102291.3-201ENSMUST00000226566 405 ntBASIC16.78■□□□□ 0.28
Ctr9Q62018 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ctr9Q62018 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ctr9Q62018 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ctr9Q62018 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Ctr9Q62018 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC16.78■□□□□ 0.28
Ctr9Q62018 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.78■□□□□ 0.28
Ctr9Q62018 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ctr9Q62018 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Ctr9Q62018 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Ctr9Q62018 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ctr9Q62018 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ctr9Q62018 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Ctr9Q62018 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ctr9Q62018 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ctr9Q62018 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Ctr9Q62018 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ctr9Q62018 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Ctr9Q62018 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC16.77■□□□□ 0.28
Ctr9Q62018 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
Ctr9Q62018 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ctr9Q62018 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ctr9Q62018 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.77■□□□□ 0.28
Ctr9Q62018 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Ctr9Q62018 Gm23547-201ENSMUST00000158210 271 ntBASIC16.77■□□□□ 0.28
Ctr9Q62018 Gm16215-201ENSMUST00000161990 637 ntBASIC16.77■□□□□ 0.28
Ctr9Q62018 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Ctr9Q62018 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ctr9Q62018 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ctr9Q62018 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Ctr9Q62018 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ctr9Q62018 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Ctr9Q62018 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ctr9Q62018 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ctr9Q62018 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ctr9Q62018 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Ctr9Q62018 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC16.77■□□□□ 0.27
Ctr9Q62018 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16.77■□□□□ 0.27
Ctr9Q62018 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ctr9Q62018 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ctr9Q62018 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Ctr9Q62018 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ctr9Q62018 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC16.76■□□□□ 0.27
Ctr9Q62018 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms