Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ddx49Q4FZF3 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ddx49Q4FZF3 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
Ddx49Q4FZF3 Gm8835-201ENSMUST00000173096 1169 ntBASIC16.55■□□□□ 0.24
Ddx49Q4FZF3 Gm6244-201ENSMUST00000178732 841 ntBASIC16.55■□□□□ 0.24
Ddx49Q4FZF3 Gm18307-201ENSMUST00000206864 949 ntBASIC16.55■□□□□ 0.24
Ddx49Q4FZF3 Gm7067-201ENSMUST00000207698 1249 ntBASIC16.55■□□□□ 0.24
Ddx49Q4FZF3 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx49Q4FZF3 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx49Q4FZF3 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx49Q4FZF3 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx49Q4FZF3 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx49Q4FZF3 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx49Q4FZF3 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx49Q4FZF3 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx49Q4FZF3 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ddx49Q4FZF3 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx49Q4FZF3 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx49Q4FZF3 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Ddx49Q4FZF3 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ddx49Q4FZF3 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx49Q4FZF3 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx49Q4FZF3 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx49Q4FZF3 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Ddx49Q4FZF3 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx49Q4FZF3 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx49Q4FZF3 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx49Q4FZF3 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Ddx49Q4FZF3 Gm9200-201ENSMUST00000118513 1354 ntBASIC16.54■□□□□ 0.24
Ddx49Q4FZF3 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Ddx49Q4FZF3 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx49Q4FZF3 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx49Q4FZF3 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx49Q4FZF3 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC16.54■□□□□ 0.24
Ddx49Q4FZF3 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC16.54■□□□□ 0.24
Ddx49Q4FZF3 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx49Q4FZF3 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx49Q4FZF3 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx49Q4FZF3 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx49Q4FZF3 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx49Q4FZF3 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx49Q4FZF3 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.54■□□□□ 0.24
Ddx49Q4FZF3 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
Ddx49Q4FZF3 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Ddx49Q4FZF3 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Ddx49Q4FZF3 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Ddx49Q4FZF3 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx49Q4FZF3 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx49Q4FZF3 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx49Q4FZF3 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx49Q4FZF3 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.53■□□□□ 0.24
Ddx49Q4FZF3 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
Ddx49Q4FZF3 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx49Q4FZF3 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
Ddx49Q4FZF3 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx49Q4FZF3 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx49Q4FZF3 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx49Q4FZF3 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx49Q4FZF3 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC16.53■□□□□ 0.24
Ddx49Q4FZF3 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
Ddx49Q4FZF3 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx49Q4FZF3 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC16.53■□□□□ 0.24
Ddx49Q4FZF3 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
Ddx49Q4FZF3 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC16.53■□□□□ 0.24
Ddx49Q4FZF3 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx49Q4FZF3 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC16.53■□□□□ 0.24
Ddx49Q4FZF3 AC156560.2-201ENSMUST00000221232 264 ntBASIC16.53■□□□□ 0.24
Ddx49Q4FZF3 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx49Q4FZF3 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx49Q4FZF3 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx49Q4FZF3 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx49Q4FZF3 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx49Q4FZF3 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx49Q4FZF3 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx49Q4FZF3 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx49Q4FZF3 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx49Q4FZF3 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx49Q4FZF3 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC16.53■□□□□ 0.24
Ddx49Q4FZF3 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
Ddx49Q4FZF3 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx49Q4FZF3 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx49Q4FZF3 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx49Q4FZF3 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC16.53■□□□□ 0.24
Ddx49Q4FZF3 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx49Q4FZF3 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Ddx49Q4FZF3 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx49Q4FZF3 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx49Q4FZF3 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx49Q4FZF3 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx49Q4FZF3 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx49Q4FZF3 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC16.52■□□□□ 0.24
Ddx49Q4FZF3 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC16.52■□□□□ 0.24
Ddx49Q4FZF3 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Ddx49Q4FZF3 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx49Q4FZF3 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx49Q4FZF3 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.52■□□□□ 0.24
Ddx49Q4FZF3 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx49Q4FZF3 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx49Q4FZF3 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx49Q4FZF3 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms