Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdkl5Q3UTQ8 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Cdkl5Q3UTQ8 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cdkl5Q3UTQ8 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdkl5Q3UTQ8 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Cdkl5Q3UTQ8 Gm9109-201ENSMUST00000120254 1405 ntBASIC16.53■□□□□ 0.24
Cdkl5Q3UTQ8 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC16.53■□□□□ 0.24
Cdkl5Q3UTQ8 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdkl5Q3UTQ8 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdkl5Q3UTQ8 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdkl5Q3UTQ8 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdkl5Q3UTQ8 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
Cdkl5Q3UTQ8 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdkl5Q3UTQ8 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cdkl5Q3UTQ8 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdkl5Q3UTQ8 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdkl5Q3UTQ8 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdkl5Q3UTQ8 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC16.52■□□□□ 0.24
Cdkl5Q3UTQ8 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdkl5Q3UTQ8 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdkl5Q3UTQ8 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Cdkl5Q3UTQ8 Gm13823-201ENSMUST00000119930 345 ntBASIC16.52■□□□□ 0.24
Cdkl5Q3UTQ8 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cdkl5Q3UTQ8 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.52■□□□□ 0.24
Cdkl5Q3UTQ8 AA619741-201ENSMUST00000195095 646 ntBASIC16.52■□□□□ 0.24
Cdkl5Q3UTQ8 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC16.52■□□□□ 0.24
Cdkl5Q3UTQ8 AC131690.1-201ENSMUST00000218406 374 ntBASIC16.52■□□□□ 0.24
Cdkl5Q3UTQ8 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Cdkl5Q3UTQ8 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Cdkl5Q3UTQ8 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Cdkl5Q3UTQ8 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdkl5Q3UTQ8 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cdkl5Q3UTQ8 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Cdkl5Q3UTQ8 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Cdkl5Q3UTQ8 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdkl5Q3UTQ8 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Cdkl5Q3UTQ8 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdkl5Q3UTQ8 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdkl5Q3UTQ8 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC16.51■□□□□ 0.23
Cdkl5Q3UTQ8 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdkl5Q3UTQ8 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdkl5Q3UTQ8 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC16.51■□□□□ 0.23
Cdkl5Q3UTQ8 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdkl5Q3UTQ8 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cdkl5Q3UTQ8 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cdkl5Q3UTQ8 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cdkl5Q3UTQ8 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
Cdkl5Q3UTQ8 AC121598.1-201ENSMUST00000228224 1019 ntBASIC16.51■□□□□ 0.23
Cdkl5Q3UTQ8 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdkl5Q3UTQ8 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdkl5Q3UTQ8 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdkl5Q3UTQ8 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdkl5Q3UTQ8 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdkl5Q3UTQ8 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cdkl5Q3UTQ8 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC16.51■□□□□ 0.23
Cdkl5Q3UTQ8 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdkl5Q3UTQ8 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdkl5Q3UTQ8 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Cdkl5Q3UTQ8 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC16.51■□□□□ 0.23
Cdkl5Q3UTQ8 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC16.51■□□□□ 0.23
Cdkl5Q3UTQ8 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdkl5Q3UTQ8 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Cdkl5Q3UTQ8 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdkl5Q3UTQ8 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdkl5Q3UTQ8 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdkl5Q3UTQ8 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdkl5Q3UTQ8 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
Cdkl5Q3UTQ8 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Cdkl5Q3UTQ8 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdkl5Q3UTQ8 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdkl5Q3UTQ8 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cdkl5Q3UTQ8 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cdkl5Q3UTQ8 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Cdkl5Q3UTQ8 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdkl5Q3UTQ8 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdkl5Q3UTQ8 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC16.5■□□□□ 0.23
Cdkl5Q3UTQ8 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC16.5■□□□□ 0.23
Cdkl5Q3UTQ8 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdkl5Q3UTQ8 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Cdkl5Q3UTQ8 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdkl5Q3UTQ8 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdkl5Q3UTQ8 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdkl5Q3UTQ8 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdkl5Q3UTQ8 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC16.5■□□□□ 0.23
Cdkl5Q3UTQ8 Gm15957-201ENSMUST00000118893 974 ntBASIC16.5■□□□□ 0.23
Cdkl5Q3UTQ8 Gm10253-201ENSMUST00000194270 940 ntBASIC16.5■□□□□ 0.23
Cdkl5Q3UTQ8 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdkl5Q3UTQ8 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cdkl5Q3UTQ8 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdkl5Q3UTQ8 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdkl5Q3UTQ8 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cdkl5Q3UTQ8 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cdkl5Q3UTQ8 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdkl5Q3UTQ8 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdkl5Q3UTQ8 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdkl5Q3UTQ8 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdkl5Q3UTQ8 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdkl5Q3UTQ8 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdkl5Q3UTQ8 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cdkl5Q3UTQ8 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 91.4 ms