Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Spg11Q3UHA3 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
Spg11Q3UHA3 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Spg11Q3UHA3 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Spg11Q3UHA3 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Spg11Q3UHA3 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Spg11Q3UHA3 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Spg11Q3UHA3 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Spg11Q3UHA3 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Spg11Q3UHA3 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Spg11Q3UHA3 Gm8749-201ENSMUST00000117737 331 ntBASIC12.98□□□□□ -0.33
Spg11Q3UHA3 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.98□□□□□ -0.33
Spg11Q3UHA3 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.98□□□□□ -0.33
Spg11Q3UHA3 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Spg11Q3UHA3 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.98□□□□□ -0.33
Spg11Q3UHA3 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Spg11Q3UHA3 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Spg11Q3UHA3 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.98□□□□□ -0.33
Spg11Q3UHA3 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.98□□□□□ -0.33
Spg11Q3UHA3 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Spg11Q3UHA3 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Spg11Q3UHA3 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Spg11Q3UHA3 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Spg11Q3UHA3 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Spg11Q3UHA3 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.98□□□□□ -0.33
Spg11Q3UHA3 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Spg11Q3UHA3 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC12.98□□□□□ -0.33
Spg11Q3UHA3 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Spg11Q3UHA3 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Spg11Q3UHA3 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Spg11Q3UHA3 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.98□□□□□ -0.33
Spg11Q3UHA3 Gm14665-201ENSMUST00000122294 557 ntBASIC12.98□□□□□ -0.33
Spg11Q3UHA3 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC12.98□□□□□ -0.33
Spg11Q3UHA3 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.98□□□□□ -0.33
Spg11Q3UHA3 Gm27772-201ENSMUST00000184900 187 ntBASIC12.98□□□□□ -0.33
Spg11Q3UHA3 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.98□□□□□ -0.33
Spg11Q3UHA3 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.98□□□□□ -0.33
Spg11Q3UHA3 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.98□□□□□ -0.33
Spg11Q3UHA3 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Spg11Q3UHA3 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.98□□□□□ -0.33
Spg11Q3UHA3 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Spg11Q3UHA3 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Spg11Q3UHA3 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Spg11Q3UHA3 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Spg11Q3UHA3 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Spg11Q3UHA3 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Spg11Q3UHA3 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Spg11Q3UHA3 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Spg11Q3UHA3 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Spg11Q3UHA3 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Spg11Q3UHA3 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Spg11Q3UHA3 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Spg11Q3UHA3 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Spg11Q3UHA3 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Spg11Q3UHA3 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Spg11Q3UHA3 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Spg11Q3UHA3 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Spg11Q3UHA3 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Spg11Q3UHA3 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Spg11Q3UHA3 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Spg11Q3UHA3 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Spg11Q3UHA3 Gm15957-201ENSMUST00000118893 974 ntBASIC12.97□□□□□ -0.33
Spg11Q3UHA3 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.97□□□□□ -0.33
Spg11Q3UHA3 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Spg11Q3UHA3 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Spg11Q3UHA3 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Spg11Q3UHA3 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Spg11Q3UHA3 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Spg11Q3UHA3 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Spg11Q3UHA3 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Spg11Q3UHA3 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Spg11Q3UHA3 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Spg11Q3UHA3 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Spg11Q3UHA3 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Spg11Q3UHA3 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Spg11Q3UHA3 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.97□□□□□ -0.33
Spg11Q3UHA3 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Spg11Q3UHA3 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Spg11Q3UHA3 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Spg11Q3UHA3 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.97□□□□□ -0.33
Spg11Q3UHA3 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Spg11Q3UHA3 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Spg11Q3UHA3 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.96□□□□□ -0.33
Spg11Q3UHA3 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC12.96□□□□□ -0.33
Spg11Q3UHA3 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Spg11Q3UHA3 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Spg11Q3UHA3 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Spg11Q3UHA3 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.96□□□□□ -0.33
Spg11Q3UHA3 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.96□□□□□ -0.33
Spg11Q3UHA3 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Spg11Q3UHA3 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Spg11Q3UHA3 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Spg11Q3UHA3 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Spg11Q3UHA3 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.33
Spg11Q3UHA3 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Spg11Q3UHA3 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Spg11Q3UHA3 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Spg11Q3UHA3 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.96□□□□□ -0.33
Spg11Q3UHA3 Gm11675-201ENSMUST00000121873 832 ntBASIC12.96□□□□□ -0.33
Spg11Q3UHA3 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms