Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp25Q3U435 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp25Q3U435 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp25Q3U435 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Mmp25Q3U435 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp25Q3U435 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp25Q3U435 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp25Q3U435 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Mmp25Q3U435 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Mmp25Q3U435 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp25Q3U435 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.4□□□□□ -0.26
Mmp25Q3U435 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp25Q3U435 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp25Q3U435 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp25Q3U435 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp25Q3U435 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp25Q3U435 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp25Q3U435 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Mmp25Q3U435 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp25Q3U435 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp25Q3U435 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp25Q3U435 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp25Q3U435 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Mmp25Q3U435 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp25Q3U435 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp25Q3U435 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp25Q3U435 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.4□□□□□ -0.26
Mmp25Q3U435 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp25Q3U435 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.4□□□□□ -0.26
Mmp25Q3U435 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp25Q3U435 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Mmp25Q3U435 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.4□□□□□ -0.26
Mmp25Q3U435 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.4□□□□□ -0.26
Mmp25Q3U435 Gm6916-202ENSMUST00000205523 195 ntBASIC13.4□□□□□ -0.26
Mmp25Q3U435 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp25Q3U435 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Mmp25Q3U435 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp25Q3U435 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.4□□□□□ -0.26
Mmp25Q3U435 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp25Q3U435 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp25Q3U435 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Mmp25Q3U435 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp25Q3U435 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp25Q3U435 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp25Q3U435 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp25Q3U435 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp25Q3U435 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp25Q3U435 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.4□□□□□ -0.26
Mmp25Q3U435 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.4□□□□□ -0.26
Mmp25Q3U435 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mmp25Q3U435 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Mmp25Q3U435 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.39□□□□□ -0.27
Mmp25Q3U435 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mmp25Q3U435 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Mmp25Q3U435 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mmp25Q3U435 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mmp25Q3U435 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Mmp25Q3U435 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mmp25Q3U435 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Mmp25Q3U435 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mmp25Q3U435 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Mmp25Q3U435 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.39□□□□□ -0.27
Mmp25Q3U435 Gm3436-201ENSMUST00000179930 840 ntBASIC13.39□□□□□ -0.27
Mmp25Q3U435 Gm7775-201ENSMUST00000218871 853 ntBASIC13.39□□□□□ -0.27
Mmp25Q3U435 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mmp25Q3U435 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mmp25Q3U435 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mmp25Q3U435 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mmp25Q3U435 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mmp25Q3U435 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mmp25Q3U435 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.39□□□□□ -0.27
Mmp25Q3U435 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Mmp25Q3U435 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.39□□□□□ -0.27
Mmp25Q3U435 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mmp25Q3U435 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mmp25Q3U435 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.39□□□□□ -0.27
Mmp25Q3U435 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mmp25Q3U435 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.39□□□□□ -0.27
Mmp25Q3U435 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mmp25Q3U435 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mmp25Q3U435 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mmp25Q3U435 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.39□□□□□ -0.27
Mmp25Q3U435 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Mmp25Q3U435 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Mmp25Q3U435 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Mmp25Q3U435 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.39□□□□□ -0.27
Mmp25Q3U435 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mmp25Q3U435 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.39□□□□□ -0.27
Mmp25Q3U435 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Mmp25Q3U435 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mmp25Q3U435 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Mmp25Q3U435 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mmp25Q3U435 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Mmp25Q3U435 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.38□□□□□ -0.27
Mmp25Q3U435 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mmp25Q3U435 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Mmp25Q3U435 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Mmp25Q3U435 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mmp25Q3U435 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Mmp25Q3U435 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms