Protein–RNA interactions for Protein: Q0PD08

Rab42, Ras-related protein Rab-42, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab42Q0PD08 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rab42Q0PD08 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab42Q0PD08 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab42Q0PD08 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab42Q0PD08 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rab42Q0PD08 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab42Q0PD08 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab42Q0PD08 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab42Q0PD08 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rab42Q0PD08 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab42Q0PD08 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab42Q0PD08 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab42Q0PD08 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab42Q0PD08 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Rab42Q0PD08 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab42Q0PD08 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab42Q0PD08 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab42Q0PD08 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.63□□□□□ -0.39
Rab42Q0PD08 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.63□□□□□ -0.39
Rab42Q0PD08 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab42Q0PD08 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC12.63□□□□□ -0.39
Rab42Q0PD08 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab42Q0PD08 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rab42Q0PD08 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab42Q0PD08 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab42Q0PD08 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab42Q0PD08 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab42Q0PD08 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rab42Q0PD08 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Rab42Q0PD08 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC12.63□□□□□ -0.39
Rab42Q0PD08 Gm7862-201ENSMUST00000121461 292 ntBASIC12.63□□□□□ -0.39
Rab42Q0PD08 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Rab42Q0PD08 Gm7230-201ENSMUST00000173026 815 ntBASIC12.63□□□□□ -0.39
Rab42Q0PD08 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.63□□□□□ -0.39
Rab42Q0PD08 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab42Q0PD08 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.63□□□□□ -0.39
Rab42Q0PD08 Gm37153-201ENSMUST00000193637 231 ntBASIC12.63□□□□□ -0.39
Rab42Q0PD08 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab42Q0PD08 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab42Q0PD08 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rab42Q0PD08 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab42Q0PD08 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.63□□□□□ -0.39
Rab42Q0PD08 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab42Q0PD08 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab42Q0PD08 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab42Q0PD08 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rab42Q0PD08 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Rab42Q0PD08 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Rab42Q0PD08 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rab42Q0PD08 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rab42Q0PD08 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rab42Q0PD08 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab42Q0PD08 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab42Q0PD08 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab42Q0PD08 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab42Q0PD08 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab42Q0PD08 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab42Q0PD08 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rab42Q0PD08 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.62□□□□□ -0.39
Rab42Q0PD08 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab42Q0PD08 Gm11764-201ENSMUST00000120221 623 ntBASIC12.62□□□□□ -0.39
Rab42Q0PD08 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC12.62□□□□□ -0.39
Rab42Q0PD08 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Rab42Q0PD08 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC12.62□□□□□ -0.39
Rab42Q0PD08 Mir8098-201ENSMUST00000184011 137 ntBASIC12.62□□□□□ -0.39
Rab42Q0PD08 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC12.62□□□□□ -0.39
Rab42Q0PD08 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Rab42Q0PD08 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.62□□□□□ -0.39
Rab42Q0PD08 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab42Q0PD08 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab42Q0PD08 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab42Q0PD08 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab42Q0PD08 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Rab42Q0PD08 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Rab42Q0PD08 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab42Q0PD08 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab42Q0PD08 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab42Q0PD08 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab42Q0PD08 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rab42Q0PD08 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rab42Q0PD08 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab42Q0PD08 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab42Q0PD08 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab42Q0PD08 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Rab42Q0PD08 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.61□□□□□ -0.39
Rab42Q0PD08 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab42Q0PD08 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.61□□□□□ -0.39
Rab42Q0PD08 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab42Q0PD08 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab42Q0PD08 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rab42Q0PD08 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab42Q0PD08 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Rab42Q0PD08 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab42Q0PD08 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rab42Q0PD08 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Rab42Q0PD08 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.61□□□□□ -0.39
Rab42Q0PD08 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Rab42Q0PD08 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rab42Q0PD08 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Rab42Q0PD08 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms