Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.94□□□□□ -0.18
Col9a1Q05722 AC129323.1-201ENSMUST00000216733 470 ntBASIC13.94□□□□□ -0.18
Col9a1Q05722 Gm36495-201ENSMUST00000221201 684 ntTSL 5 BASIC13.94□□□□□ -0.18
Col9a1Q05722 AC154176.1-201ENSMUST00000225897 220 ntBASIC13.94□□□□□ -0.18
Col9a1Q05722 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.94□□□□□ -0.18
Col9a1Q05722 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col9a1Q05722 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col9a1Q05722 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col9a1Q05722 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col9a1Q05722 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col9a1Q05722 Gm13571-201ENSMUST00000124654 1381 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col9a1Q05722 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col9a1Q05722 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col9a1Q05722 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col9a1Q05722 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col9a1Q05722 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Col9a1Q05722 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col9a1Q05722 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col9a1Q05722 Celf4-206ENSMUST00000224553 1729 ntBASIC13.93□□□□□ -0.18
Col9a1Q05722 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col9a1Q05722 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Col9a1Q05722 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col9a1Q05722 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.93□□□□□ -0.18
Col9a1Q05722 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col9a1Q05722 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col9a1Q05722 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col9a1Q05722 Gm24830-201ENSMUST00000102024 166 ntBASIC13.93□□□□□ -0.18
Col9a1Q05722 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Col9a1Q05722 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC13.93□□□□□ -0.18
Col9a1Q05722 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col9a1Q05722 Gm25890-201ENSMUST00000177643 165 ntBASIC13.93□□□□□ -0.18
Col9a1Q05722 Rnu1b2-201ENSMUST00000178073 165 ntBASIC13.93□□□□□ -0.18
Col9a1Q05722 Rnu1b1-201ENSMUST00000178250 165 ntBASIC13.93□□□□□ -0.18
Col9a1Q05722 Gm22614-201ENSMUST00000178300 165 ntBASIC13.93□□□□□ -0.18
Col9a1Q05722 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC13.93□□□□□ -0.18
Col9a1Q05722 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col9a1Q05722 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col9a1Q05722 Gm44548-201ENSMUST00000208929 192 ntBASIC13.93□□□□□ -0.18
Col9a1Q05722 Gm6983-201ENSMUST00000214912 628 ntBASIC13.93□□□□□ -0.18
Col9a1Q05722 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.93□□□□□ -0.18
Col9a1Q05722 AC099645.1-201ENSMUST00000226476 1105 ntBASIC13.93□□□□□ -0.18
Col9a1Q05722 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col9a1Q05722 Gm22042-201ENSMUST00000082989 165 ntBASIC13.93□□□□□ -0.18
Col9a1Q05722 Gm26232-201ENSMUST00000083360 166 ntBASIC13.93□□□□□ -0.18
Col9a1Q05722 Gm24136-201ENSMUST00000083374 165 ntBASIC13.93□□□□□ -0.18
Col9a1Q05722 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.93□□□□□ -0.18
Col9a1Q05722 Gm26110-201ENSMUST00000083971 165 ntBASIC13.93□□□□□ -0.18
Col9a1Q05722 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col9a1Q05722 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.93□□□□□ -0.18
Col9a1Q05722 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col9a1Q05722 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col9a1Q05722 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col9a1Q05722 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.93□□□□□ -0.18
Col9a1Q05722 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col9a1Q05722 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col9a1Q05722 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col9a1Q05722 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col9a1Q05722 Gm12816-201ENSMUST00000118069 1212 ntBASIC13.92□□□□□ -0.18
Col9a1Q05722 Gm14301-201ENSMUST00000120181 324 ntBASIC13.92□□□□□ -0.18
Col9a1Q05722 Gm25109-201ENSMUST00000122474 114 ntBASIC13.92□□□□□ -0.18
Col9a1Q05722 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.92□□□□□ -0.18
Col9a1Q05722 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col9a1Q05722 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col9a1Q05722 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col9a1Q05722 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.92□□□□□ -0.18
Col9a1Q05722 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Col9a1Q05722 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC13.92□□□□□ -0.18
Col9a1Q05722 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.92□□□□□ -0.18
Col9a1Q05722 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col9a1Q05722 Gm45770-201ENSMUST00000212105 616 ntBASIC13.92□□□□□ -0.18
Col9a1Q05722 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC13.92□□□□□ -0.18
Col9a1Q05722 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col9a1Q05722 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Col9a1Q05722 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col9a1Q05722 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col9a1Q05722 Gm5879-201ENSMUST00000089501 1209 ntBASIC13.92□□□□□ -0.18
Col9a1Q05722 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col9a1Q05722 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Col9a1Q05722 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col9a1Q05722 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col9a1Q05722 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Col9a1Q05722 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col9a1Q05722 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col9a1Q05722 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col9a1Q05722 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Col9a1Q05722 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.91□□□□□ -0.18
Col9a1Q05722 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col9a1Q05722 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col9a1Q05722 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col9a1Q05722 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col9a1Q05722 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col9a1Q05722 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col9a1Q05722 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col9a1Q05722 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.91□□□□□ -0.18
Col9a1Q05722 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col9a1Q05722 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.91□□□□□ -0.18
Col9a1Q05722 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC13.91□□□□□ -0.18
Col9a1Q05722 Celrr-201ENSMUST00000181183 1194 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col9a1Q05722 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col9a1Q05722 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms