Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Gm21826-201ENSMUST00000187451 696 ntBASIC13.49□□□□□ -0.25
Nkx3-2P97503 Gm21198-201ENSMUST00000188393 696 ntBASIC13.49□□□□□ -0.25
Nkx3-2P97503 Gm21749-201ENSMUST00000189343 696 ntBASIC13.49□□□□□ -0.25
Nkx3-2P97503 Gm21901-201ENSMUST00000189568 696 ntBASIC13.49□□□□□ -0.25
Nkx3-2P97503 Gm29424-201ENSMUST00000189716 696 ntBASIC13.49□□□□□ -0.25
Nkx3-2P97503 Gm28599-201ENSMUST00000189838 694 ntBASIC13.49□□□□□ -0.25
Nkx3-2P97503 Gm21867-201ENSMUST00000189917 696 ntBASIC13.49□□□□□ -0.25
Nkx3-2P97503 Gm29269-201ENSMUST00000190087 696 ntBASIC13.49□□□□□ -0.25
Nkx3-2P97503 Gm21722-201ENSMUST00000190153 696 ntBASIC13.49□□□□□ -0.25
Nkx3-2P97503 Gm28423-201ENSMUST00000190701 696 ntBASIC13.49□□□□□ -0.25
Nkx3-2P97503 Gm21899-201ENSMUST00000190745 696 ntBASIC13.49□□□□□ -0.25
Nkx3-2P97503 Gm21910-201ENSMUST00000191163 696 ntBASIC13.49□□□□□ -0.25
Nkx3-2P97503 Gm21849-201ENSMUST00000191571 696 ntBASIC13.49□□□□□ -0.25
Nkx3-2P97503 Gm28678-201ENSMUST00000191593 696 ntBASIC13.49□□□□□ -0.25
Nkx3-2P97503 Gm20910-201ENSMUST00000193268 696 ntBASIC13.49□□□□□ -0.25
Nkx3-2P97503 Gm21871-201ENSMUST00000194621 696 ntBASIC13.49□□□□□ -0.25
Nkx3-2P97503 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx3-2P97503 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx3-2P97503 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.49□□□□□ -0.25
Nkx3-2P97503 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.49□□□□□ -0.25
Nkx3-2P97503 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx3-2P97503 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx3-2P97503 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx3-2P97503 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Nkx3-2P97503 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx3-2P97503 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx3-2P97503 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx3-2P97503 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
Nkx3-2P97503 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Nkx3-2P97503 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx3-2P97503 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx3-2P97503 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.49□□□□□ -0.25
Nkx3-2P97503 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx3-2P97503 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx3-2P97503 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.49□□□□□ -0.25
Nkx3-2P97503 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx3-2P97503 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx3-2P97503 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.49□□□□□ -0.25
Nkx3-2P97503 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx3-2P97503 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx3-2P97503 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx3-2P97503 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx3-2P97503 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx3-2P97503 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.48□□□□□ -0.25
Nkx3-2P97503 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx3-2P97503 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx3-2P97503 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx3-2P97503 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx3-2P97503 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx3-2P97503 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx3-2P97503 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx3-2P97503 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.48□□□□□ -0.25
Nkx3-2P97503 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.48□□□□□ -0.25
Nkx3-2P97503 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx3-2P97503 Gm9726-201ENSMUST00000180321 678 ntBASIC13.48□□□□□ -0.25
Nkx3-2P97503 Gm38294-201ENSMUST00000192831 381 ntBASIC13.48□□□□□ -0.25
Nkx3-2P97503 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Nkx3-2P97503 Gm44344-201ENSMUST00000200287 129 ntBASIC13.48□□□□□ -0.25
Nkx3-2P97503 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx3-2P97503 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx3-2P97503 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Nkx3-2P97503 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx3-2P97503 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx3-2P97503 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx3-2P97503 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx3-2P97503 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx3-2P97503 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx3-2P97503 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx3-2P97503 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx3-2P97503 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.47□□□□□ -0.25
Nkx3-2P97503 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.47□□□□□ -0.25
Nkx3-2P97503 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
Nkx3-2P97503 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx3-2P97503 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx3-2P97503 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx3-2P97503 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Nkx3-2P97503 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx3-2P97503 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx3-2P97503 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.47□□□□□ -0.25
Nkx3-2P97503 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx3-2P97503 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx3-2P97503 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx3-2P97503 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Nkx3-2P97503 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx3-2P97503 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx3-2P97503 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Nkx3-2P97503 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.47□□□□□ -0.25
Nkx3-2P97503 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.47□□□□□ -0.25
Nkx3-2P97503 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.47□□□□□ -0.25
Nkx3-2P97503 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx3-2P97503 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx3-2P97503 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx3-2P97503 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx3-2P97503 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx3-2P97503 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx3-2P97503 Gm7775-201ENSMUST00000218871 853 ntBASIC13.47□□□□□ -0.25
Nkx3-2P97503 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.47□□□□□ -0.25
Nkx3-2P97503 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx3-2P97503 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx3-2P97503 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms