Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm37812-201ENSMUST00000195216 2475 ntBASIC12.72□□□□□ -0.37
SgcbP82349 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.72□□□□□ -0.37
SgcbP82349 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SgcbP82349 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SgcbP82349 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SgcbP82349 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcbP82349 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcbP82349 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcbP82349 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcbP82349 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcbP82349 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.72□□□□□ -0.37
SgcbP82349 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.72□□□□□ -0.37
SgcbP82349 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.72□□□□□ -0.37
SgcbP82349 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
SgcbP82349 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcbP82349 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SgcbP82349 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.72□□□□□ -0.37
SgcbP82349 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SgcbP82349 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.72□□□□□ -0.37
SgcbP82349 Gm6888-201ENSMUST00000221983 706 ntBASIC12.72□□□□□ -0.37
SgcbP82349 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.72□□□□□ -0.37
SgcbP82349 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.72□□□□□ -0.37
SgcbP82349 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
SgcbP82349 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcbP82349 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
SgcbP82349 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcbP82349 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SgcbP82349 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcbP82349 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcbP82349 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcbP82349 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.72□□□□□ -0.37
SgcbP82349 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcbP82349 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcbP82349 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcbP82349 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcbP82349 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcbP82349 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SgcbP82349 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
SgcbP82349 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcbP82349 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.72□□□□□ -0.37
SgcbP82349 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SgcbP82349 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SgcbP82349 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.71□□□□□ -0.37
SgcbP82349 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SgcbP82349 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
SgcbP82349 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SgcbP82349 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SgcbP82349 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC12.71□□□□□ -0.37
SgcbP82349 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SgcbP82349 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
SgcbP82349 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
SgcbP82349 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SgcbP82349 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.71□□□□□ -0.37
SgcbP82349 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SgcbP82349 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
SgcbP82349 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.71□□□□□ -0.37
SgcbP82349 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SgcbP82349 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SgcbP82349 Gm27618-201ENSMUST00000183671 60 ntBASIC12.71□□□□□ -0.37
SgcbP82349 Gm28630-201ENSMUST00000187806 498 ntBASIC12.71□□□□□ -0.37
SgcbP82349 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SgcbP82349 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.71□□□□□ -0.37
SgcbP82349 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.71□□□□□ -0.37
SgcbP82349 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.71□□□□□ -0.37
SgcbP82349 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SgcbP82349 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SgcbP82349 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SgcbP82349 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
SgcbP82349 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
SgcbP82349 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SgcbP82349 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
SgcbP82349 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.71□□□□□ -0.38
SgcbP82349 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SgcbP82349 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.71□□□□□ -0.38
SgcbP82349 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SgcbP82349 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SgcbP82349 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
SgcbP82349 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SgcbP82349 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SgcbP82349 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SgcbP82349 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SgcbP82349 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SgcbP82349 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SgcbP82349 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.7□□□□□ -0.38
SgcbP82349 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SgcbP82349 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SgcbP82349 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.7□□□□□ -0.38
SgcbP82349 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
SgcbP82349 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
SgcbP82349 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
SgcbP82349 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SgcbP82349 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.7□□□□□ -0.38
SgcbP82349 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.7□□□□□ -0.38
SgcbP82349 Gm27631-201ENSMUST00000184163 466 ntBASIC12.7□□□□□ -0.38
SgcbP82349 AA619741-201ENSMUST00000195095 646 ntBASIC12.7□□□□□ -0.38
SgcbP82349 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SgcbP82349 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.7□□□□□ -0.38
SgcbP82349 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.7□□□□□ -0.38
SgcbP82349 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.7□□□□□ -0.38
SgcbP82349 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms