Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
Lhx1P63006 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Lhx1P63006 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx1P63006 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx1P63006 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx1P63006 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx1P63006 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx1P63006 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Lhx1P63006 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx1P63006 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx1P63006 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Lhx1P63006 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx1P63006 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx1P63006 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx1P63006 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx1P63006 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx1P63006 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx1P63006 Gm5866-201ENSMUST00000177881 973 ntBASIC13.98□□□□□ -0.17
Lhx1P63006 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx1P63006 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx1P63006 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.98□□□□□ -0.17
Lhx1P63006 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.98□□□□□ -0.17
Lhx1P63006 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Lhx1P63006 Gm20445-201ENSMUST00000061905 565 ntBASIC13.98□□□□□ -0.17
Lhx1P63006 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Lhx1P63006 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx1P63006 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx1P63006 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx1P63006 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx1P63006 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.98□□□□□ -0.17
Lhx1P63006 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Lhx1P63006 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx1P63006 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx1P63006 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx1P63006 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx1P63006 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx1P63006 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx1P63006 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lhx1P63006 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Lhx1P63006 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx1P63006 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.97□□□□□ -0.17
Lhx1P63006 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx1P63006 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.97□□□□□ -0.17
Lhx1P63006 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx1P63006 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx1P63006 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx1P63006 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx1P63006 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Lhx1P63006 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx1P63006 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx1P63006 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx1P63006 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Lhx1P63006 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Lhx1P63006 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.97□□□□□ -0.17
Lhx1P63006 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Lhx1P63006 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Lhx1P63006 Gm4804-201ENSMUST00000182234 999 ntBASIC13.97□□□□□ -0.17
Lhx1P63006 Gm7063-201ENSMUST00000186840 981 ntBASIC13.97□□□□□ -0.17
Lhx1P63006 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.97□□□□□ -0.17
Lhx1P63006 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Lhx1P63006 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx1P63006 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx1P63006 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx1P63006 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.97□□□□□ -0.17
Lhx1P63006 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx1P63006 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx1P63006 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx1P63006 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
Lhx1P63006 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx1P63006 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx1P63006 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx1P63006 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx1P63006 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.97□□□□□ -0.17
Lhx1P63006 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx1P63006 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx1P63006 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Lhx1P63006 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx1P63006 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx1P63006 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.97□□□□□ -0.17
Lhx1P63006 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lhx1P63006 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.97□□□□□ -0.17
Lhx1P63006 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lhx1P63006 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Lhx1P63006 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Lhx1P63006 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
Lhx1P63006 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lhx1P63006 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lhx1P63006 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.96□□□□□ -0.17
Lhx1P63006 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.96□□□□□ -0.17
Lhx1P63006 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Lhx1P63006 Gm16215-201ENSMUST00000161990 637 ntBASIC13.96□□□□□ -0.17
Lhx1P63006 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Lhx1P63006 Gm21470-201ENSMUST00000187680 696 ntBASIC13.96□□□□□ -0.17
Lhx1P63006 Gm29667-201ENSMUST00000190817 490 ntBASIC13.96□□□□□ -0.17
Lhx1P63006 Gm5425-201ENSMUST00000214125 459 ntBASIC13.96□□□□□ -0.17
Lhx1P63006 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.96□□□□□ -0.17
Lhx1P63006 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.96□□□□□ -0.17
Lhx1P63006 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Lhx1P63006 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lhx1P63006 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms