Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Sec61a1P61620 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Sec61a1P61620 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a1P61620 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a1P61620 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a1P61620 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a1P61620 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.58□□□□□ -0.4
Sec61a1P61620 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a1P61620 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Sec61a1P61620 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Sec61a1P61620 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a1P61620 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a1P61620 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a1P61620 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a1P61620 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.58□□□□□ -0.4
Sec61a1P61620 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Sec61a1P61620 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC12.58□□□□□ -0.4
Sec61a1P61620 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a1P61620 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.58□□□□□ -0.4
Sec61a1P61620 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a1P61620 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.58□□□□□ -0.4
Sec61a1P61620 Gm44492-201ENSMUST00000197012 141 ntBASIC12.58□□□□□ -0.4
Sec61a1P61620 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a1P61620 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.58□□□□□ -0.4
Sec61a1P61620 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a1P61620 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a1P61620 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a1P61620 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a1P61620 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Sec61a1P61620 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a1P61620 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Sec61a1P61620 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a1P61620 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a1P61620 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a1P61620 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a1P61620 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a1P61620 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a1P61620 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a1P61620 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a1P61620 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.58□□□□□ -0.4
Sec61a1P61620 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a1P61620 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a1P61620 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a1P61620 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Sec61a1P61620 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a1P61620 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61a1P61620 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61a1P61620 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.57□□□□□ -0.4
Sec61a1P61620 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61a1P61620 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Sec61a1P61620 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.57□□□□□ -0.4
Sec61a1P61620 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Sec61a1P61620 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Sec61a1P61620 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61a1P61620 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61a1P61620 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.57□□□□□ -0.4
Sec61a1P61620 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61a1P61620 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.57□□□□□ -0.4
Sec61a1P61620 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61a1P61620 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.57□□□□□ -0.4
Sec61a1P61620 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Sec61a1P61620 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61a1P61620 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61a1P61620 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61a1P61620 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61a1P61620 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Sec61a1P61620 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61a1P61620 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61a1P61620 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.57□□□□□ -0.4
Sec61a1P61620 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC12.57□□□□□ -0.4
Sec61a1P61620 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61a1P61620 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.57□□□□□ -0.4
Sec61a1P61620 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.57□□□□□ -0.4
Sec61a1P61620 Gm6736-201ENSMUST00000166583 948 ntBASIC12.57□□□□□ -0.4
Sec61a1P61620 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.57□□□□□ -0.4
Sec61a1P61620 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.57□□□□□ -0.4
Sec61a1P61620 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61a1P61620 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Sec61a1P61620 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61a1P61620 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61a1P61620 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.57□□□□□ -0.4
Sec61a1P61620 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61a1P61620 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.57□□□□□ -0.4
Sec61a1P61620 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61a1P61620 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Sec61a1P61620 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61a1P61620 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61a1P61620 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61a1P61620 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.57□□□□□ -0.4
Sec61a1P61620 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61a1P61620 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sec61a1P61620 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sec61a1P61620 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sec61a1P61620 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sec61a1P61620 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sec61a1P61620 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sec61a1P61620 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.56□□□□□ -0.4
Sec61a1P61620 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Sec61a1P61620 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sec61a1P61620 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms